mirror of
https://git.gfz-potsdam.de/naaice/iphreeqc.git
synced 2025-12-15 16:18:22 +01:00
ci(github-actions): comment out cmake.yml workflow
This commit is contained in:
parent
cd4c26beed
commit
9d48f28708
854
.github/workflows/cmake.yml
vendored
854
.github/workflows/cmake.yml
vendored
@ -1,296 +1,296 @@
|
||||
name: CMake
|
||||
|
||||
on:
|
||||
push:
|
||||
|
||||
pull_request:
|
||||
branches:
|
||||
- master
|
||||
|
||||
schedule:
|
||||
- cron: '15 14 4,11,18,25 * *'
|
||||
|
||||
workflow_dispatch:
|
||||
|
||||
env:
|
||||
# Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
|
||||
BUILD_TYPE: Release
|
||||
NAME: IPhreeqc
|
||||
|
||||
jobs:
|
||||
|
||||
init:
|
||||
runs-on: ubuntu-latest
|
||||
# Map step outputs to job outputs
|
||||
outputs:
|
||||
VER: ${{ steps.vars.outputs.VER }}
|
||||
REL: ${{ steps.vars.outputs.REL }}
|
||||
DATE: ${{ steps.vars.outputs.DATE }}
|
||||
DATE_RFC_3339: ${{ steps.vars.outputs.DATE_RFC_3339 }}
|
||||
steps:
|
||||
- name: Setup vars
|
||||
id: vars
|
||||
run: |
|
||||
echo VER=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/next_ver.sh | sh) >> $GITHUB_OUTPUT
|
||||
echo REL=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/rel.py | python3) >> $GITHUB_OUTPUT
|
||||
echo DATE=$(date "+%x") >> $GITHUB_OUTPUT
|
||||
echo DATE_RFC_3339=$(date --rfc-3339=date) >> $GITHUB_OUTPUT
|
||||
|
||||
|
||||
test:
|
||||
strategy:
|
||||
fail-fast: false
|
||||
matrix:
|
||||
os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
|
||||
runs-on: ${{ matrix.os }}
|
||||
env:
|
||||
BUILD_DIR: _ctest # set in ctest.cmake
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@v4
|
||||
|
||||
- name: Install ninja valgrind (Linux)
|
||||
if: runner.os == 'Linux'
|
||||
run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
|
||||
|
||||
- name: Install ninja (macOS)
|
||||
if: runner.os == 'macOS'
|
||||
run: brew install ninja
|
||||
|
||||
- name: Set up Visual Studio shell (Windows)
|
||||
if: runner.os == 'Windows'
|
||||
uses: egor-tensin/vs-shell@v2
|
||||
with:
|
||||
arch: x64
|
||||
|
||||
- name: CTest
|
||||
run: ctest -S ctest.cmake -V --output-on-failure --timeout 900
|
||||
|
||||
- name: Upload results
|
||||
uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: ${{ matrix.os }}-${{ github.job }}-results
|
||||
path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
|
||||
test-shared:
|
||||
strategy:
|
||||
fail-fast: false
|
||||
matrix:
|
||||
os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
|
||||
runs-on: ${{ matrix.os }}
|
||||
env:
|
||||
BUILD_DIR: _ctest_shared # set in ctest-shared.cmake
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@v4
|
||||
|
||||
- name: Install ninja valgrind (Linux)
|
||||
if: runner.os == 'Linux'
|
||||
run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
|
||||
|
||||
- name: Install ninja (macOS)
|
||||
if: runner.os == 'macOS'
|
||||
run: brew install ninja
|
||||
|
||||
- name: Set up Visual Studio shell (Windows)
|
||||
if: runner.os == 'Windows'
|
||||
uses: egor-tensin/vs-shell@v2
|
||||
with:
|
||||
arch: x64
|
||||
|
||||
- name: CTest
|
||||
run: ctest -S ctest-shared.cmake -V --output-on-failure --timeout 900
|
||||
|
||||
- name: Upload results
|
||||
uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: ${{ matrix.os }}-${{ github.job }}-results
|
||||
path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
|
||||
test-clang:
|
||||
strategy:
|
||||
fail-fast: false
|
||||
matrix:
|
||||
os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
shared_libs: [OFF, ON]
|
||||
enable_module: [OFF, ON]
|
||||
|
||||
runs-on: ${{ matrix.os }}
|
||||
env:
|
||||
BUILD_DIR: _build
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@v4
|
||||
|
||||
- name: Install ninja valgrind (Linux)
|
||||
if: runner.os == 'Linux'
|
||||
run: sudo apt-get update && sudo apt-get install -y ninja-build clang valgrind
|
||||
|
||||
- name: Install ninja (macOS)
|
||||
if: runner.os == 'macOS'
|
||||
run: brew install ninja
|
||||
|
||||
- name: Set up Visual Studio shell (Windows)
|
||||
if: runner.os == 'Windows'
|
||||
uses: egor-tensin/vs-shell@v2
|
||||
with:
|
||||
arch: x64
|
||||
|
||||
- name: CMake configure
|
||||
if: runner.os == 'Linux'
|
||||
run: CC=clang CXX=clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
|
||||
- name: CMake configure
|
||||
if: runner.os == 'macOS'
|
||||
run: CC=$(brew --prefix llvm@15)/bin/clang CXX=$(brew --prefix llvm@15)/bin/clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
|
||||
- name: CMake configure
|
||||
if: runner.os == 'Windows'
|
||||
run: cmake -B ${{ env.BUILD_DIR }} -A x64 -T "ClangCL" -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
|
||||
- name: CMake build
|
||||
run: cmake --build ${{ env.BUILD_DIR }}
|
||||
|
||||
- name: CTest
|
||||
run: ctest --test-dir ${{ env.BUILD_DIR }}
|
||||
|
||||
- name: Upload results
|
||||
uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: ${{ matrix.os }}-${{ github.job }}-SHARED=${{ matrix.shared_libs }}-MODULE=${{ matrix.enable_module }}-results
|
||||
path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
|
||||
chm:
|
||||
runs-on: windows-latest
|
||||
|
||||
steps:
|
||||
- name: Checkout phreeqc3-HTMLversion
|
||||
uses: actions/checkout@v4
|
||||
with:
|
||||
repository: usgs-coupled-subtrees/phreeqc3-HTMLversion
|
||||
ref: master
|
||||
|
||||
- name: cache htmlhelp
|
||||
id: cache-htmlhelp
|
||||
uses: actions/cache@v4
|
||||
with:
|
||||
path: "C:/Program Files (x86)/HTML Help Workshop"
|
||||
key: ${{ runner.os }}-htmlhelp
|
||||
|
||||
- name: install htmlhelp
|
||||
if: steps.cache-htmlhelp.outputs.cache-hit != 'true'
|
||||
timeout-minutes: 5
|
||||
run: |
|
||||
curl -L -O --max-time 120 http://web.archive.org/web/20160201063255/http://download.microsoft.com/download/0/A/9/0A939EF6-E31C-430F-A3DF-DFAE7960D564/htmlhelp.exe
|
||||
cmd /c start /wait .\htmlhelp.exe /q /c /t:$(Get-Location)\tmp
|
||||
$file = "$(Get-Location)\tmp\htmlhelp.inf"
|
||||
(Get-Content $file) | Foreach-Object { $_ `
|
||||
-replace '^BeginPrompt', ';;BeginPrompt' `
|
||||
-replace '^EndPrompt', ';;EndPrompt' `
|
||||
-replace '^49000=CustomLDID49000, 1', '49000=CustomLDID49000, 5' `
|
||||
-replace '^"hhupd.exe', ';;hhupd.exe' `
|
||||
-replace '^DefaultInstallDir="C:\\Program Files\\HTML Help Workshop"', 'DefaultInstallDir="%ProgramFiles%\\HTML Help Workshop"'
|
||||
} | Set-Content $file
|
||||
cmd /c start /wait .\tmp\setup.exe
|
||||
Remove-Item -Recurse -Force .\tmp
|
||||
Remove-Item -Recurse -Force .\htmlhelp.exe
|
||||
# the next line doesn't seem to work (supposed to set the path)
|
||||
# echo 'C:\Program Files (x86)\HTML Help Workshop' >> $GITHUB_PATH
|
||||
|
||||
- name: compile chm
|
||||
shell: bash
|
||||
run: |
|
||||
pushd HTML
|
||||
bash fixup_html.bash
|
||||
popd
|
||||
# hhc returns 1 on success
|
||||
set +e
|
||||
'C:\Program Files (x86)\HTML Help Workshop\hhc' phreeqc3.hhp | tee hhc.out
|
||||
status=${PIPESTATUS[0]}
|
||||
set -e
|
||||
if [ "$status" -eq 1 ]; then
|
||||
echo "[OK]"
|
||||
exit 0
|
||||
else
|
||||
echo "[FAILED]"
|
||||
exit 1
|
||||
fi
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: chm
|
||||
path: ${{github.workspace}}/phreeqc3.chm
|
||||
|
||||
|
||||
R-CMD-check:
|
||||
needs: [init]
|
||||
runs-on: ${{ matrix.config.os }}
|
||||
|
||||
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
|
||||
|
||||
strategy:
|
||||
fail-fast: false
|
||||
matrix:
|
||||
config:
|
||||
- {os: macos-latest, r: 'release'}
|
||||
- {os: windows-latest, r: 'release'}
|
||||
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
|
||||
- {os: ubuntu-latest, r: 'release'}
|
||||
- {os: ubuntu-latest, r: 'oldrel-1'}
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@v4
|
||||
|
||||
- name: versioning
|
||||
run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
|
||||
|
||||
- name: Setup R
|
||||
uses: r-lib/actions/setup-r@v2
|
||||
with:
|
||||
r-version: ${{ matrix.config.r }}
|
||||
http-user-agent: ${{ matrix.config.http-user-agent }}
|
||||
use-public-rspm: true
|
||||
|
||||
- name: create source
|
||||
working-directory: R
|
||||
run: make VERSION=${{ needs.init.outputs.VER }} RELEASE_DATE=${{ needs.init.outputs.DATE_RFC_3339 }} source
|
||||
|
||||
- name: Install dependencies
|
||||
uses: r-lib/actions/setup-r-dependencies@v2
|
||||
with:
|
||||
extra-packages: any::roxygen2, any::pkgbuild, any::rcmdcheck
|
||||
needs: roxygen2, pkgbuild, check
|
||||
working-directory: R/phreeqc
|
||||
|
||||
- name: Display sessionInfo()
|
||||
run: sessionInfo()
|
||||
working-directory: R/phreeqc
|
||||
shell: Rscript {0}
|
||||
|
||||
- name: roxygen2::roxygenise()
|
||||
run: roxygen2::roxygenise()
|
||||
working-directory: R/phreeqc
|
||||
shell: Rscript {0}
|
||||
|
||||
- name: Check
|
||||
uses: r-lib/actions/check-r-package@v2
|
||||
with:
|
||||
working-directory: R/phreeqc
|
||||
|
||||
- name: List files
|
||||
if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
|
||||
run: |
|
||||
pwd
|
||||
ls -lR
|
||||
find -name "*.tar.gz"
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
|
||||
with:
|
||||
name: cran
|
||||
path: ${{ github.workspace }}/R/phreeqc/check/phreeqc_*.tar.gz
|
||||
# name: CMake
|
||||
#
|
||||
# on:
|
||||
# push:
|
||||
#
|
||||
# pull_request:
|
||||
# branches:
|
||||
# - master
|
||||
#
|
||||
# schedule:
|
||||
# - cron: '15 14 4,11,18,25 * *'
|
||||
#
|
||||
# workflow_dispatch:
|
||||
#
|
||||
# env:
|
||||
# # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
|
||||
# BUILD_TYPE: Release
|
||||
# NAME: IPhreeqc
|
||||
#
|
||||
# jobs:
|
||||
#
|
||||
# init:
|
||||
# runs-on: ubuntu-latest
|
||||
# # Map step outputs to job outputs
|
||||
# outputs:
|
||||
# VER: ${{ steps.vars.outputs.VER }}
|
||||
# REL: ${{ steps.vars.outputs.REL }}
|
||||
# DATE: ${{ steps.vars.outputs.DATE }}
|
||||
# DATE_RFC_3339: ${{ steps.vars.outputs.DATE_RFC_3339 }}
|
||||
# steps:
|
||||
# - name: Setup vars
|
||||
# id: vars
|
||||
# run: |
|
||||
# echo VER=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/next_ver.sh | sh) >> $GITHUB_OUTPUT
|
||||
# echo REL=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/rel.py | python3) >> $GITHUB_OUTPUT
|
||||
# echo DATE=$(date "+%x") >> $GITHUB_OUTPUT
|
||||
# echo DATE_RFC_3339=$(date --rfc-3339=date) >> $GITHUB_OUTPUT
|
||||
#
|
||||
#
|
||||
# test:
|
||||
# strategy:
|
||||
# fail-fast: false
|
||||
# matrix:
|
||||
# os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
#
|
||||
# runs-on: ${{ matrix.os }}
|
||||
# env:
|
||||
# BUILD_DIR: _ctest # set in ctest.cmake
|
||||
#
|
||||
# steps:
|
||||
# - uses: actions/checkout@v4
|
||||
#
|
||||
# - name: Install ninja valgrind (Linux)
|
||||
# if: runner.os == 'Linux'
|
||||
# run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
|
||||
#
|
||||
# - name: Install ninja (macOS)
|
||||
# if: runner.os == 'macOS'
|
||||
# run: brew install ninja
|
||||
#
|
||||
# - name: Set up Visual Studio shell (Windows)
|
||||
# if: runner.os == 'Windows'
|
||||
# uses: egor-tensin/vs-shell@v2
|
||||
# with:
|
||||
# arch: x64
|
||||
#
|
||||
# - name: CTest
|
||||
# run: ctest -S ctest.cmake -V --output-on-failure --timeout 900
|
||||
#
|
||||
# - name: Upload results
|
||||
# uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: ${{ matrix.os }}-${{ github.job }}-results
|
||||
# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
#
|
||||
# test-shared:
|
||||
# strategy:
|
||||
# fail-fast: false
|
||||
# matrix:
|
||||
# os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
#
|
||||
# runs-on: ${{ matrix.os }}
|
||||
# env:
|
||||
# BUILD_DIR: _ctest_shared # set in ctest-shared.cmake
|
||||
#
|
||||
# steps:
|
||||
# - uses: actions/checkout@v4
|
||||
#
|
||||
# - name: Install ninja valgrind (Linux)
|
||||
# if: runner.os == 'Linux'
|
||||
# run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
|
||||
#
|
||||
# - name: Install ninja (macOS)
|
||||
# if: runner.os == 'macOS'
|
||||
# run: brew install ninja
|
||||
#
|
||||
# - name: Set up Visual Studio shell (Windows)
|
||||
# if: runner.os == 'Windows'
|
||||
# uses: egor-tensin/vs-shell@v2
|
||||
# with:
|
||||
# arch: x64
|
||||
#
|
||||
# - name: CTest
|
||||
# run: ctest -S ctest-shared.cmake -V --output-on-failure --timeout 900
|
||||
#
|
||||
# - name: Upload results
|
||||
# uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: ${{ matrix.os }}-${{ github.job }}-results
|
||||
# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
#
|
||||
# test-clang:
|
||||
# strategy:
|
||||
# fail-fast: false
|
||||
# matrix:
|
||||
# os: [macos-latest, ubuntu-latest, windows-latest]
|
||||
# shared_libs: [OFF, ON]
|
||||
# enable_module: [OFF, ON]
|
||||
#
|
||||
# runs-on: ${{ matrix.os }}
|
||||
# env:
|
||||
# BUILD_DIR: _build
|
||||
#
|
||||
# steps:
|
||||
# - uses: actions/checkout@v4
|
||||
#
|
||||
# - name: Install ninja valgrind (Linux)
|
||||
# if: runner.os == 'Linux'
|
||||
# run: sudo apt-get update && sudo apt-get install -y ninja-build clang valgrind
|
||||
#
|
||||
# - name: Install ninja (macOS)
|
||||
# if: runner.os == 'macOS'
|
||||
# run: brew install ninja
|
||||
#
|
||||
# - name: Set up Visual Studio shell (Windows)
|
||||
# if: runner.os == 'Windows'
|
||||
# uses: egor-tensin/vs-shell@v2
|
||||
# with:
|
||||
# arch: x64
|
||||
#
|
||||
# - name: CMake configure
|
||||
# if: runner.os == 'Linux'
|
||||
# run: CC=clang CXX=clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
#
|
||||
# - name: CMake configure
|
||||
# if: runner.os == 'macOS'
|
||||
# run: CC=$(brew --prefix llvm@15)/bin/clang CXX=$(brew --prefix llvm@15)/bin/clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
#
|
||||
# - name: CMake configure
|
||||
# if: runner.os == 'Windows'
|
||||
# run: cmake -B ${{ env.BUILD_DIR }} -A x64 -T "ClangCL" -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
|
||||
#
|
||||
# - name: CMake build
|
||||
# run: cmake --build ${{ env.BUILD_DIR }}
|
||||
#
|
||||
# - name: CTest
|
||||
# run: ctest --test-dir ${{ env.BUILD_DIR }}
|
||||
#
|
||||
# - name: Upload results
|
||||
# uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: ${{ matrix.os }}-${{ github.job }}-SHARED=${{ matrix.shared_libs }}-MODULE=${{ matrix.enable_module }}-results
|
||||
# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
|
||||
#
|
||||
# chm:
|
||||
# runs-on: windows-latest
|
||||
#
|
||||
# steps:
|
||||
# - name: Checkout phreeqc3-HTMLversion
|
||||
# uses: actions/checkout@v4
|
||||
# with:
|
||||
# repository: usgs-coupled-subtrees/phreeqc3-HTMLversion
|
||||
# ref: master
|
||||
#
|
||||
# - name: cache htmlhelp
|
||||
# id: cache-htmlhelp
|
||||
# uses: actions/cache@v4
|
||||
# with:
|
||||
# path: "C:/Program Files (x86)/HTML Help Workshop"
|
||||
# key: ${{ runner.os }}-htmlhelp
|
||||
#
|
||||
# - name: install htmlhelp
|
||||
# if: steps.cache-htmlhelp.outputs.cache-hit != 'true'
|
||||
# timeout-minutes: 5
|
||||
# run: |
|
||||
# curl -L -O --max-time 120 http://web.archive.org/web/20160201063255/http://download.microsoft.com/download/0/A/9/0A939EF6-E31C-430F-A3DF-DFAE7960D564/htmlhelp.exe
|
||||
# cmd /c start /wait .\htmlhelp.exe /q /c /t:$(Get-Location)\tmp
|
||||
# $file = "$(Get-Location)\tmp\htmlhelp.inf"
|
||||
# (Get-Content $file) | Foreach-Object { $_ `
|
||||
# -replace '^BeginPrompt', ';;BeginPrompt' `
|
||||
# -replace '^EndPrompt', ';;EndPrompt' `
|
||||
# -replace '^49000=CustomLDID49000, 1', '49000=CustomLDID49000, 5' `
|
||||
# -replace '^"hhupd.exe', ';;hhupd.exe' `
|
||||
# -replace '^DefaultInstallDir="C:\\Program Files\\HTML Help Workshop"', 'DefaultInstallDir="%ProgramFiles%\\HTML Help Workshop"'
|
||||
# } | Set-Content $file
|
||||
# cmd /c start /wait .\tmp\setup.exe
|
||||
# Remove-Item -Recurse -Force .\tmp
|
||||
# Remove-Item -Recurse -Force .\htmlhelp.exe
|
||||
# # the next line doesn't seem to work (supposed to set the path)
|
||||
# # echo 'C:\Program Files (x86)\HTML Help Workshop' >> $GITHUB_PATH
|
||||
#
|
||||
# - name: compile chm
|
||||
# shell: bash
|
||||
# run: |
|
||||
# pushd HTML
|
||||
# bash fixup_html.bash
|
||||
# popd
|
||||
# # hhc returns 1 on success
|
||||
# set +e
|
||||
# 'C:\Program Files (x86)\HTML Help Workshop\hhc' phreeqc3.hhp | tee hhc.out
|
||||
# status=${PIPESTATUS[0]}
|
||||
# set -e
|
||||
# if [ "$status" -eq 1 ]; then
|
||||
# echo "[OK]"
|
||||
# exit 0
|
||||
# else
|
||||
# echo "[FAILED]"
|
||||
# exit 1
|
||||
# fi
|
||||
#
|
||||
# - uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: chm
|
||||
# path: ${{github.workspace}}/phreeqc3.chm
|
||||
#
|
||||
#
|
||||
# R-CMD-check:
|
||||
# needs: [init]
|
||||
# runs-on: ${{ matrix.config.os }}
|
||||
#
|
||||
# name: ${{ matrix.config.os }} (${{ matrix.config.r }})
|
||||
#
|
||||
# strategy:
|
||||
# fail-fast: false
|
||||
# matrix:
|
||||
# config:
|
||||
# - {os: macos-latest, r: 'release'}
|
||||
# - {os: windows-latest, r: 'release'}
|
||||
# - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
|
||||
# - {os: ubuntu-latest, r: 'release'}
|
||||
# - {os: ubuntu-latest, r: 'oldrel-1'}
|
||||
#
|
||||
# steps:
|
||||
# - uses: actions/checkout@v4
|
||||
#
|
||||
# - name: versioning
|
||||
# run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
|
||||
#
|
||||
# - name: Setup R
|
||||
# uses: r-lib/actions/setup-r@v2
|
||||
# with:
|
||||
# r-version: ${{ matrix.config.r }}
|
||||
# http-user-agent: ${{ matrix.config.http-user-agent }}
|
||||
# use-public-rspm: true
|
||||
#
|
||||
# - name: create source
|
||||
# working-directory: R
|
||||
# run: make VERSION=${{ needs.init.outputs.VER }} RELEASE_DATE=${{ needs.init.outputs.DATE_RFC_3339 }} source
|
||||
#
|
||||
# - name: Install dependencies
|
||||
# uses: r-lib/actions/setup-r-dependencies@v2
|
||||
# with:
|
||||
# extra-packages: any::roxygen2, any::pkgbuild, any::rcmdcheck
|
||||
# needs: roxygen2, pkgbuild, check
|
||||
# working-directory: R/phreeqc
|
||||
#
|
||||
# - name: Display sessionInfo()
|
||||
# run: sessionInfo()
|
||||
# working-directory: R/phreeqc
|
||||
# shell: Rscript {0}
|
||||
#
|
||||
# - name: roxygen2::roxygenise()
|
||||
# run: roxygen2::roxygenise()
|
||||
# working-directory: R/phreeqc
|
||||
# shell: Rscript {0}
|
||||
#
|
||||
# - name: Check
|
||||
# uses: r-lib/actions/check-r-package@v2
|
||||
# with:
|
||||
# working-directory: R/phreeqc
|
||||
#
|
||||
# - name: List files
|
||||
# if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
|
||||
# run: |
|
||||
# pwd
|
||||
# ls -lR
|
||||
# find -name "*.tar.gz"
|
||||
#
|
||||
# - uses: actions/upload-artifact@v4
|
||||
# if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
|
||||
# with:
|
||||
# name: cran
|
||||
# path: ${{ github.workspace }}/R/phreeqc/check/phreeqc_*.tar.gz
|
||||
|
||||
|
||||
# r-build:
|
||||
@ -373,140 +373,140 @@ jobs:
|
||||
# path: ${{github.workspace}}/R/valgrind.full.out
|
||||
|
||||
|
||||
distcheck:
|
||||
needs: [init, chm]
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- uses: actions/checkout@v4
|
||||
|
||||
- uses: actions/download-artifact@v4
|
||||
with:
|
||||
name: chm
|
||||
|
||||
- name: mv chm
|
||||
run: mv phreeqc3.chm doc/.
|
||||
|
||||
- name: versioning
|
||||
run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
|
||||
|
||||
- name: doxygen
|
||||
run: sudo apt-get install -y doxygen && cd doc && doxygen
|
||||
|
||||
- name: autoreconf
|
||||
run: autoreconf -fvi
|
||||
|
||||
- name: mkdir
|
||||
run: mkdir _build
|
||||
|
||||
- name: configure
|
||||
working-directory: ${{github.workspace}}/_build
|
||||
run: ../configure --prefix=$(pwd)/INSTALL
|
||||
|
||||
- name: make
|
||||
working-directory: ${{github.workspace}}/_build
|
||||
run: make -j2 distcheck
|
||||
|
||||
- name: convert
|
||||
run: |
|
||||
sudo apt install -y dos2unix
|
||||
native="
|
||||
doc/Makefile \
|
||||
doc/examples/AccumulateLine.c \
|
||||
doc/examples/CreateIPhreeqc.c \
|
||||
doc/examples/F90ClearAccumulatedLines.f90 \
|
||||
doc/examples/F90CreateIPhreeqc.f90 \
|
||||
doc/examples/F90DestroyIPhreeqc.f90 \
|
||||
doc/examples/F90GetComponent.f90 \
|
||||
doc/examples/F90GetDumpStringLine.f90 \
|
||||
doc/examples/F90GetSelectedOutputValue.f90 \
|
||||
doc/examples/F90GetVersionString.f90 \
|
||||
doc/examples/GetComponent.c \
|
||||
doc/examples/GetDumpString.c \
|
||||
doc/examples/GetSelectedOutputValue.c \
|
||||
doc/examples/GetVersionString.c \
|
||||
doc/examples/IPhreeqc.cpp \
|
||||
doc/examples/Makefile \
|
||||
doc/examples/phreeqc.dat \
|
||||
src/CSelectedOutput.cpp \
|
||||
src/CSelectedOutput.hxx \
|
||||
src/CVar.hxx \
|
||||
src/Debug.h \
|
||||
src/ErrorReporter.hxx \
|
||||
src/IPhreeqc.cpp \
|
||||
src/IPhreeqc.f.inc \
|
||||
src/IPhreeqc.f90.inc \
|
||||
src/IPhreeqc.h \
|
||||
src/IPhreeqc.hpp \
|
||||
src/IPhreeqcCallbacks.h \
|
||||
src/IPhreeqcF.f \
|
||||
src/IPhreeqcLib.cpp \
|
||||
src/IPhreeqc_interface.F90 \
|
||||
src/IPhreeqc_interface_F.cpp \
|
||||
src/IPhreeqc_interface_F.h \
|
||||
src/Var.c \
|
||||
src/Var.h \
|
||||
src/Version.h \
|
||||
src/fimpl.h \
|
||||
src/fwrap.cpp \
|
||||
src/fwrap.h \
|
||||
src/fwrap1.cpp \
|
||||
src/fwrap2.cpp \
|
||||
src/fwrap3.cpp \
|
||||
src/fwrap4.cpp \
|
||||
src/fwrap5.cpp \
|
||||
src/fwrap6.cpp \
|
||||
src/fwrap7.cpp \
|
||||
src/fwrap8.cpp \
|
||||
src/pp_sys.cpp \
|
||||
src/thread.h \
|
||||
test/llnl.dat \
|
||||
test/phreeqc.dat \
|
||||
test2/Makefile \
|
||||
test2/wateq4f.dat \
|
||||
test5/Makefile \
|
||||
test5/phreeqc.dat \
|
||||
test5/test5.c \
|
||||
tests/main_fortran.cxx \
|
||||
tests/test_c.c \
|
||||
tests/test_cxx.cxx \
|
||||
tests/test_f90.F90 \
|
||||
unit/TestCVar.cpp \
|
||||
unit/TestCVar.h \
|
||||
unit/TestInterface.cpp \
|
||||
unit/TestInterface.h \
|
||||
unit/TestSelectedOutput.cpp \
|
||||
unit/TestSelectedOutput.h \
|
||||
unit/TestVar.cpp \
|
||||
unit/TestVar.h \
|
||||
unit/llnl.dat.old \
|
||||
unit/missing_e.dat \
|
||||
unit/phreeqc.dat.old \
|
||||
unit/unit.cpp"
|
||||
for f in ${native}; do
|
||||
unix2dos "${f}"
|
||||
done
|
||||
|
||||
- name: dist-zip
|
||||
working-directory: ${{github.workspace}}/_build
|
||||
run: make dist-zip
|
||||
|
||||
- name: copy
|
||||
run: cp doc/README IPhreeqc_ReadMe.txt
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: readme
|
||||
path: ${{github.workspace}}/IPhreeqc_ReadMe.txt
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: tarball
|
||||
path: ${{github.workspace}}/_build/*.tar.gz
|
||||
|
||||
- uses: actions/upload-artifact@v4
|
||||
with:
|
||||
name: zipball
|
||||
path: ${{github.workspace}}/_build/*.zip
|
||||
# distcheck:
|
||||
# needs: [init, chm]
|
||||
# runs-on: ubuntu-latest
|
||||
# steps:
|
||||
# - uses: actions/checkout@v4
|
||||
#
|
||||
# - uses: actions/download-artifact@v4
|
||||
# with:
|
||||
# name: chm
|
||||
#
|
||||
# - name: mv chm
|
||||
# run: mv phreeqc3.chm doc/.
|
||||
#
|
||||
# - name: versioning
|
||||
# run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
|
||||
#
|
||||
# - name: doxygen
|
||||
# run: sudo apt-get install -y doxygen && cd doc && doxygen
|
||||
#
|
||||
# - name: autoreconf
|
||||
# run: autoreconf -fvi
|
||||
#
|
||||
# - name: mkdir
|
||||
# run: mkdir _build
|
||||
#
|
||||
# - name: configure
|
||||
# working-directory: ${{github.workspace}}/_build
|
||||
# run: ../configure --prefix=$(pwd)/INSTALL
|
||||
#
|
||||
# - name: make
|
||||
# working-directory: ${{github.workspace}}/_build
|
||||
# run: make -j2 distcheck
|
||||
#
|
||||
# - name: convert
|
||||
# run: |
|
||||
# sudo apt install -y dos2unix
|
||||
# native="
|
||||
# doc/Makefile \
|
||||
# doc/examples/AccumulateLine.c \
|
||||
# doc/examples/CreateIPhreeqc.c \
|
||||
# doc/examples/F90ClearAccumulatedLines.f90 \
|
||||
# doc/examples/F90CreateIPhreeqc.f90 \
|
||||
# doc/examples/F90DestroyIPhreeqc.f90 \
|
||||
# doc/examples/F90GetComponent.f90 \
|
||||
# doc/examples/F90GetDumpStringLine.f90 \
|
||||
# doc/examples/F90GetSelectedOutputValue.f90 \
|
||||
# doc/examples/F90GetVersionString.f90 \
|
||||
# doc/examples/GetComponent.c \
|
||||
# doc/examples/GetDumpString.c \
|
||||
# doc/examples/GetSelectedOutputValue.c \
|
||||
# doc/examples/GetVersionString.c \
|
||||
# doc/examples/IPhreeqc.cpp \
|
||||
# doc/examples/Makefile \
|
||||
# doc/examples/phreeqc.dat \
|
||||
# src/CSelectedOutput.cpp \
|
||||
# src/CSelectedOutput.hxx \
|
||||
# src/CVar.hxx \
|
||||
# src/Debug.h \
|
||||
# src/ErrorReporter.hxx \
|
||||
# src/IPhreeqc.cpp \
|
||||
# src/IPhreeqc.f.inc \
|
||||
# src/IPhreeqc.f90.inc \
|
||||
# src/IPhreeqc.h \
|
||||
# src/IPhreeqc.hpp \
|
||||
# src/IPhreeqcCallbacks.h \
|
||||
# src/IPhreeqcF.f \
|
||||
# src/IPhreeqcLib.cpp \
|
||||
# src/IPhreeqc_interface.F90 \
|
||||
# src/IPhreeqc_interface_F.cpp \
|
||||
# src/IPhreeqc_interface_F.h \
|
||||
# src/Var.c \
|
||||
# src/Var.h \
|
||||
# src/Version.h \
|
||||
# src/fimpl.h \
|
||||
# src/fwrap.cpp \
|
||||
# src/fwrap.h \
|
||||
# src/fwrap1.cpp \
|
||||
# src/fwrap2.cpp \
|
||||
# src/fwrap3.cpp \
|
||||
# src/fwrap4.cpp \
|
||||
# src/fwrap5.cpp \
|
||||
# src/fwrap6.cpp \
|
||||
# src/fwrap7.cpp \
|
||||
# src/fwrap8.cpp \
|
||||
# src/pp_sys.cpp \
|
||||
# src/thread.h \
|
||||
# test/llnl.dat \
|
||||
# test/phreeqc.dat \
|
||||
# test2/Makefile \
|
||||
# test2/wateq4f.dat \
|
||||
# test5/Makefile \
|
||||
# test5/phreeqc.dat \
|
||||
# test5/test5.c \
|
||||
# tests/main_fortran.cxx \
|
||||
# tests/test_c.c \
|
||||
# tests/test_cxx.cxx \
|
||||
# tests/test_f90.F90 \
|
||||
# unit/TestCVar.cpp \
|
||||
# unit/TestCVar.h \
|
||||
# unit/TestInterface.cpp \
|
||||
# unit/TestInterface.h \
|
||||
# unit/TestSelectedOutput.cpp \
|
||||
# unit/TestSelectedOutput.h \
|
||||
# unit/TestVar.cpp \
|
||||
# unit/TestVar.h \
|
||||
# unit/llnl.dat.old \
|
||||
# unit/missing_e.dat \
|
||||
# unit/phreeqc.dat.old \
|
||||
# unit/unit.cpp"
|
||||
# for f in ${native}; do
|
||||
# unix2dos "${f}"
|
||||
# done
|
||||
#
|
||||
# - name: dist-zip
|
||||
# working-directory: ${{github.workspace}}/_build
|
||||
# run: make dist-zip
|
||||
#
|
||||
# - name: copy
|
||||
# run: cp doc/README IPhreeqc_ReadMe.txt
|
||||
#
|
||||
# - uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: readme
|
||||
# path: ${{github.workspace}}/IPhreeqc_ReadMe.txt
|
||||
#
|
||||
# - uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: tarball
|
||||
# path: ${{github.workspace}}/_build/*.tar.gz
|
||||
#
|
||||
# - uses: actions/upload-artifact@v4
|
||||
# with:
|
||||
# name: zipball
|
||||
# path: ${{github.workspace}}/_build/*.zip
|
||||
|
||||
# build:
|
||||
# needs: [init]
|
||||
|
||||
Loading…
x
Reference in New Issue
Block a user