Squashed 'examples/c/' changes from 8d5070c9..2a2707ae

2a2707ae [iphreeqccom] updated date
a203e0cf [iphreeqc] updated image location
aa055fc9 added README to examples
e1f78666 added CMakeLists.txt to examples
23fa9771 fixed to run on linux; cleaned examples
7dade0c0 [phreeqc] Testing subtree merges
445c6945 [phreeqc] Testing subtree merges 2
294e42f6 [phreeqc] Testing subtree merges
d664f890 Added .gitlab-ci.yml
513a83ee Closes https://gitlab.cr.usgs.gov/coupled/IPhreeqc/issues/6

git-subtree-dir: examples/c
git-subtree-split: 2a2707ae767123b1418ca2250e14df6caa65d6e2
This commit is contained in:
Darth Vader 2021-10-30 22:54:20 +00:00
parent 8d5070c9f9
commit f7383cafbb
7 changed files with 120 additions and 721 deletions

49
.gitlab-ci.yml Normal file
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@ -0,0 +1,49 @@
#
# https://code.chs.usgs.gov/coupled/subtrees/phreeqc-commanuscript-cgfinal-examples-c
# SRC 2020-12-02T18:39:55-07:00
#
image: ${CI_REGISTRY}/coupled/containers/buildpack-deps:bionic-scm
stages:
- trigger
before_script:
- eval $(ssh-agent -s)
- echo "${SSH_PRIVATE_KEY_ENC}" | base64 --decode | tr -d '\r' | ssh-add -
- mkdir -p ~/.ssh
- chmod 700 ~/.ssh
- ssh-keyscan ${CI_SERVER_HOST} >> ~/.ssh/known_hosts
- chmod 644 ~/.ssh/known_hosts
- git config --global user.email "darth@empire.com"
- git config --global user.name "Darth Vader"
trigger-downstream:
stage: trigger
##
## Only run if on the master branch and the variable GROUP is set
##
## change this to
## only:
## - master@$GROUP/subtrees/phreeqc-commanuscript-cgfinal-examples-c
## and set GROUP to coupled before merge
only:
refs:
- master
variables:
- $GROUP
## Downstream Projects
## triggers and ids are stored at the group level
## iphreeqc https://code.chs.usgs.gov/coupled/iphreeqc
## iphreeqccom https://code.chs.usgs.gov/coupled/iphreeqccom
## phreeqc https://code.chs.usgs.gov/coupled/phreeqc
script:
- echo triggering iphreeqc
- curl -X POST -F token=${IPHREEQC_TRIGGER} -F ref=master https://code.chs.usgs.gov/api/v4/projects/${IPHREEQC_ID}/trigger/pipeline
- echo triggering iphreeqccom
- curl -X POST -F token=${IPHREEQCCOM_TRIGGER} -F ref=master https://code.chs.usgs.gov/api/v4/projects/${IPHREEQCCOM_ID}/trigger/pipeline
- echo triggering phreeqc
- curl -X POST -F token=${PHREEQC_TRIGGER} -F ref=master https://code.chs.usgs.gov/api/v4/projects/${PHREEQC_ID}/trigger/pipeline
## Upstream Projects
## none

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@ -1,11 +1,17 @@
# project
project(example_advect_c C)
configure_file(phreeqc.dat phreeqc.dat COPYONLY)
configure_file(ic ic COPYONLY)
configure_file(CMakeLists.txt.in CMakeLists.txt COPYONLY)
# files
SET(C_Advect_Files
${IPhreeqc_BINARY_DIR}/examples/c/advect/CMakeLists.txt
advect.c
ic
phreeqc.dat
README.txt
)
# src
@ -27,6 +33,3 @@ SET(C_Advect_Dir ${EXAMPLES_DIR}/c/advect)
# install
install(FILES ${C_Advect_Files} DESTINATION ${C_Advect_Dir})

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advect/CMakeLists.txt.in Normal file
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# set minimum cmake version
cmake_minimum_required(VERSION 3.10)
# set project name along with language
# iphreeqc requires CXX
project(advect_c CXX C)
# copy necessary files into build directory
configure_file(phreeqc.dat phreeqc.dat COPYONLY)
configure_file(ic ic COPYONLY)
# find IPhreeqc export package
# set CMAKE_PREFIX_PATH or IPhreeqc_DIR to the
# location of the IPhreeqcConfig.cmake file
find_package(IPhreeqc 3 REQUIRED)
# add executable target
add_executable(advect_c advect.c)
# set link libraries as well as include paths
target_link_libraries(advect_c IPhreeqc::IPhreeqc)

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@ -1,2 +0,0 @@
all::
g++ advect.c -o advect -I /lobo02home/dlpark/programs/iphreeqc-3.0.6-7757/release1/include -L /lobo02home/dlpark/programs/iphreeqc-3.0.6-7757/release1/lib -liphreeqc -lm

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advect/README.txt Normal file
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@ -0,0 +1,44 @@
Example usage
--------------------------------------------------------------------------------------
Windows
--------------------------------------------------------------------------------------
Configure, build, test and install IPhreeqc
1. cd iphreeqc-@VERSION@-@REVISION@
2. mkdir _build
3. cd _build
4. cmake -S .. -B . -DCMAKE_INSTALL_PREFIX:PATH=c:/Users/charlton/iphreeqc
5. cmake --build . --config debug
6. ctest -C debug
7. cmake --build . --config release
8. ctest -C release
9. cmake --build . --config debug --target install
10. cmake --build . --config release --target install
Build example:
1. cd c:\Users\charlton\iphreeqc\examples\c\advect
2. mkdir _build
3. cd _build
4. cmake -DCMAKE_PREFIX_PATH:PATH=c:/Users/charlton/iphreeqc ..
5. cmake --build . --config release
--------------------------------------------------------------------------------------
Linux/macOS
--------------------------------------------------------------------------------------
Configure, build, test and install IPhreeqc
1. cd iphreeqc-@VERSION@-@REVISION@
2. mkdir _build
3. cd _build
4. cmake -S .. -B . -DCMAKE_INSTALL_PREFIX:PATH=/home/charlton/iphreeqc
5. cmake --build .
6. ctest
7. cmake --build . --target install
Build example:
1. cd /home/charlton/iphreeqc/share/doc/IPhreeqc/examples/c/advect
2. mkdir _build
3. cd _build
4. cmake -DCMAKE_PREFIX_PATH:PATH=/home/charlton/iphreeqc ..
5. cmake --build .

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@ -1,38 +0,0 @@

Microsoft Visual Studio Solution File, Format Version 9.00
# Visual Studio 2005
Project("{8BC9CEB8-8B4A-11D0-8D11-00A0C91BC942}") = "advect_c", "advect_c.vcproj", "{BD883425-1DD0-466A-911B-32AD6D4CE262}"
EndProject
Global
GlobalSection(SolutionConfigurationPlatforms) = preSolution
Debug|Win32 = Debug|Win32
Debug|x64 = Debug|x64
DebugDll|Win32 = DebugDll|Win32
DebugDll|x64 = DebugDll|x64
Release|Win32 = Release|Win32
Release|x64 = Release|x64
ReleaseDll|Win32 = ReleaseDll|Win32
ReleaseDll|x64 = ReleaseDll|x64
EndGlobalSection
GlobalSection(ProjectConfigurationPlatforms) = postSolution
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Debug|Win32.ActiveCfg = Debug|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Debug|Win32.Build.0 = Debug|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Debug|x64.ActiveCfg = Debug|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Debug|x64.Build.0 = Debug|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.DebugDll|Win32.ActiveCfg = DebugDll|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.DebugDll|Win32.Build.0 = DebugDll|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.DebugDll|x64.ActiveCfg = DebugDll|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.DebugDll|x64.Build.0 = DebugDll|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Release|Win32.ActiveCfg = Release|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Release|Win32.Build.0 = Release|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Release|x64.ActiveCfg = Release|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.Release|x64.Build.0 = Release|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.ReleaseDll|Win32.ActiveCfg = ReleaseDll|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.ReleaseDll|Win32.Build.0 = ReleaseDll|Win32
{BD883425-1DD0-466A-911B-32AD6D4CE262}.ReleaseDll|x64.ActiveCfg = ReleaseDll|x64
{BD883425-1DD0-466A-911B-32AD6D4CE262}.ReleaseDll|x64.Build.0 = ReleaseDll|x64
EndGlobalSection
GlobalSection(SolutionProperties) = preSolution
HideSolutionNode = FALSE
EndGlobalSection
EndGlobal

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@ -1,678 +0,0 @@
<?xml version="1.0" encoding="Windows-1252"?>
<VisualStudioProject
ProjectType="Visual C++"
Version="8.00"
Name="advect_c"
ProjectGUID="{BD883425-1DD0-466A-911B-32AD6D4CE262}"
RootNamespace="advect_c"
Keyword="Win32Proj"
>
<Platforms>
<Platform
Name="Win32"
/>
<Platform
Name="x64"
/>
</Platforms>
<ToolFiles>
</ToolFiles>
<Configurations>
<Configuration
Name="Debug|Win32"
OutputDirectory="$(SolutionDir)$(ConfigurationName)"
IntermediateDirectory="$(ConfigurationName)"
ConfigurationType="1"
CharacterSet="1"
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<Tool
Name="VCPreBuildEventTool"
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<Tool
Name="VCCustomBuildTool"
/>
<Tool
Name="VCXMLDataGeneratorTool"
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<Tool
Name="VCWebServiceProxyGeneratorTool"
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<Tool
Name="VCMIDLTool"
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<Tool
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AdditionalIncludeDirectories="../../../include"
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BasicRuntimeChecks="3"
RuntimeLibrary="1"
UsePrecompiledHeader="0"
WarningLevel="3"
Detect64BitPortabilityProblems="true"
DebugInformationFormat="4"
/>
<Tool
Name="VCManagedResourceCompilerTool"
/>
<Tool
Name="VCResourceCompilerTool"
/>
<Tool
Name="VCPreLinkEventTool"
/>
<Tool
Name="VCLinkerTool"
AdditionalDependencies="IPhreeqcd.lib"
LinkIncremental="2"
AdditionalLibraryDirectories="../../../lib"
GenerateDebugInformation="true"
SubSystem="1"
TargetMachine="1"
/>
<Tool
Name="VCALinkTool"
/>
<Tool
Name="VCManifestTool"
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<Tool
Name="VCXDCMakeTool"
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<Tool
Name="VCBscMakeTool"
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<Tool
Name="VCFxCopTool"
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<Tool
Name="VCAppVerifierTool"
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<Tool
Name="VCWebDeploymentTool"
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<Tool
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</Configuration>
<Configuration
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OutputDirectory="$(SolutionDir)$(ConfigurationName)"
IntermediateDirectory="$(ConfigurationName)"
ConfigurationType="1"
CharacterSet="1"
WholeProgramOptimization="1"
>
<Tool
Name="VCPreBuildEventTool"
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<Tool
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<Tool
Name="VCXMLDataGeneratorTool"
/>
<Tool
Name="VCWebServiceProxyGeneratorTool"
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<Tool
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<Tool
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PreprocessorDefinitions="WIN32;NDEBUG;_CONSOLE;_CRT_SECURE_NO_WARNINGS"
RuntimeLibrary="0"
UsePrecompiledHeader="0"
WarningLevel="3"
Detect64BitPortabilityProblems="true"
DebugInformationFormat="3"
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<Tool
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<Tool
Name="VCResourceCompilerTool"
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<Tool
Name="VCPreLinkEventTool"
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<Tool
Name="VCLinkerTool"
AdditionalDependencies="IPhreeqc.lib"
LinkIncremental="1"
AdditionalLibraryDirectories="../../../lib"
GenerateDebugInformation="true"
SubSystem="1"
OptimizeReferences="2"
EnableCOMDATFolding="2"
TargetMachine="1"
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<Tool
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<Tool
Name="VCBscMakeTool"
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<Tool
Name="VCFxCopTool"
/>
<Tool
Name="VCAppVerifierTool"
/>
<Tool
Name="VCWebDeploymentTool"
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<Tool
Name="VCPostBuildEventTool"
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</Configuration>
<Configuration
Name="ReleaseDll|Win32"
OutputDirectory="$(SolutionDir)$(ConfigurationName)"
IntermediateDirectory="$(ConfigurationName)"
ConfigurationType="1"
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WholeProgramOptimization="1"
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
Name="VCLinkerTool"
AdditionalDependencies="IPhreeqc.lib"
LinkIncremental="1"
AdditionalLibraryDirectories="../../../dll"
GenerateDebugInformation="true"
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OptimizeReferences="2"
EnableCOMDATFolding="2"
TargetMachine="1"
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<Tool
Name="VCALinkTool"
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<Tool
Name="VCBscMakeTool"
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<Tool
Name="VCFxCopTool"
/>
<Tool
Name="VCAppVerifierTool"
/>
<Tool
Name="VCWebDeploymentTool"
/>
<Tool
Name="VCPostBuildEventTool"
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</Configuration>
<Configuration
Name="DebugDll|Win32"
OutputDirectory="$(SolutionDir)$(ConfigurationName)"
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<Tool
Name="VCPreBuildEventTool"
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<Tool
Name="VCCustomBuildTool"
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<Tool
Name="VCXMLDataGeneratorTool"
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<Tool
Name="VCWebServiceProxyGeneratorTool"
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<Tool
Name="VCMIDLTool"
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<Tool
Name="VCCLCompilerTool"
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RuntimeLibrary="3"
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WarningLevel="3"
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
Name="VCAppVerifierTool"
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<Tool
Name="VCWebDeploymentTool"
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<Tool
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</Configuration>
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<Tool
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<Tool
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<Tool
Name="VCAppVerifierTool"
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<Tool
Name="VCWebDeploymentTool"
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<Tool
Name="VCPostBuildEventTool"
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</Configuration>
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Name="Release|x64"
OutputDirectory="$(SolutionDir)$(PlatformName)\$(ConfigurationName)"
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WholeProgramOptimization="1"
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<Tool
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<References>
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<Files>
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<File
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