rewrote WriteRestart to use DumpModule
Don't call DumpModule from manager/worker, now only in WriteFils
fixed DumpModule to work for serial and parallel. Uses dump_file_name with no adjustments to extensions.
added LastInitialPhreeqc2Module(vector<int> cell_numbers).
Changed args in RunFile and RunString in PhreeqcRM to bools, affected
RM_interface.cpp, RM_interface_C.cpp, Tests/advection_cpp.cpp
In Copy for cxxStorageBin, check if destination == source.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@8411 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Moved DumpModule
Fixed logic in InitialPhreeqc2Concentrations
Fixed logic in cxxStorageBin::read_raw
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@8283 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Restart may be working. Need to clean up RMHelper and WriteFiles.
Need to add dump facility.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@8278 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Also no MERGE_FILES in PHREEQC
Not sure about deallocates in worker_closef
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@7045 1feff8c3-07ed-0310-ac33-dd36852eb9cd
However, now need 4 configurations for IPhreeqc Debug/Release USE_MPI.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@7036 1feff8c3-07ed-0310-ac33-dd36852eb9cd
updated project.
moved PHAST_IPhreeqc to IPhreeqcPhast
removed const from StorageBin getters.
Fixed some compile errors.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@6776 1feff8c3-07ed-0310-ac33-dd36852eb9cd
All reactant structs have been removed.
Tony's pressure uses mu in pressure term of log_k.
Test cases run, discriminant check at 1e-8.
Still want to optimize out some k_temp calls and checks for same T, P, mu.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@6269 1feff8c3-07ed-0310-ac33-dd36852eb9cd
finished rename of s_s_assemblage and SSassemblageSS
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@6032 1feff8c3-07ed-0310-ac33-dd36852eb9cd
get_line moved to PHRQ_io.
Still debugging some.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5967 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Left old code commented.
Will remove old code next svn revision.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5948 1feff8c3-07ed-0310-ac33-dd36852eb9cd
works with sformatf to allow indefinite length strings.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5936 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Still need to look at copy, dump, and maybe others.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5844 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Dump reaction_pressure raw also works.
Started using templates in Utils.h for map manipulations.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5842 1feff8c3-07ed-0310-ac33-dd36852eb9cd
removed all PHREEQC_CLASS ifdefs
Need to remove old_io ifdefs
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5712 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Missing KT_MIX_RAW in Parser.
Storage bin, renamed removeXxx to Remove_Xxx.
Added missing mix, reaction, temperature to dump_raw.
Added missing mix read_raw to storagebin read_raw.
Removed storagebin add(struct system), not used.
Added missing mix, reaction, temperature in storagebin remove.
Added storagebin Clear to remove all data. Hopefully does not leak memory.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5692 1feff8c3-07ed-0310-ac33-dd36852eb9cd
clean up some consts.
Adding methods for Mix, Reaction, Temperature.
Need parallel method for exchange_ptr_to_user for mix, irrev, temperature.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5689 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Not sure about the cxx to system. Commented for now.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5660 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Removed most SKIP ifdefs
ran test cases OK.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5657 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Did Surface, charge and comp.
Now can clean up some more.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5656 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Removed some commented PHREEQC_PTR_ARG from headers.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5652 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Removed commented PHREEQC_PTR from some of the header files.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5651 1feff8c3-07ed-0310-ac33-dd36852eb9cd
some methods.
Began moving xx2struct into phreeqc from class definitions.
First moved was cxxMix2mix to structures.c.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5648 1feff8c3-07ed-0310-ac33-dd36852eb9cd
Started removing PHREEQC_PTR and P_INSTANCE. Redid all read_raw.
Breaks some echoing or printing of output. Need to check why.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5646 1feff8c3-07ed-0310-ac33-dd36852eb9cd
NameDouble, StorageBinListItem.
NumKeyword inherits from PHRQ_base, others inherit NumKeyword.
ChartHandler and ChartObject inherit from PHRQ_base.
CurveObject does not inherit from PHRQ_base.
git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/branches/ErrorHandling@5637 1feff8c3-07ed-0310-ac33-dd36852eb9cd
