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251 Commits

Author SHA1 Message Date
Scott R Charlton
38a71d8350 bug fix for dist 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9723 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-26 07:48:17 +00:00
Scott R Charlton
a4495e79c6 unifying with CMake build 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9722 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-26 07:24:57 +00:00
Scott R Charlton
351ae02993 unifying CMake and configure builds 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9720 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-26 06:21:06 +00:00
Scott R Charlton
518a8d16f8 added missing fwrap.h/fwrap.cpp to EXTRA_DIST 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9717 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-22 03:50:48 +00:00
Scott R Charlton
dc90ea3c60 added comment 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9716 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-22 02:33:33 +00:00
Scott R Charlton
02feef6bce updated SetBasicFortranCallback for fortran module 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9715 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-22 01:12:48 +00:00
Scott R Charlton
c089909820 install src 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9711 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-21 21:49:18 +00:00
Scott R Charlton
9ca8fafe2d added inc files to dist 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9698 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-21 00:14:13 +00:00
David L Parkhurst
1edb7b89d9 working on print/punch processing issue 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9657 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-14 19:45:41 +00:00
Scott R Charlton
59af250088 fixed mismatched intents warning 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9643 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-05-12 22:52:34 +00:00
David L Parkhurst
0046094905 removed minimal rebuild in solution. 
added implicit none for all subroutine, functions, and interfaces.
removed unused variables (commented).
added explicit definitions for any variables missing declarations.
rewrote integers used as logical
ended do loops with a continue statement
fixed error with ch_basin_permil_ET in phreeq_mms.f90
Disabled some Fortran diagnostics
Fixed error in change of module for xdebug_start, xdebug_stop


git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9474 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-04-07 17:26:35 +00:00
David L Parkhurst
f31a2c2679 len=l for callback fortran string. 
Made basic callback string a "const" in 8 places.


git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9463 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-04-02 22:59:33 +00:00
Scott R Charlton
599603aaff added missing file for CMake 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9444 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-04-01 01:51:54 +00:00
David L Parkhurst
0fbbf16cba Close to having Basic callback working. 
Need to test Fortran, C, and C++.

git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9437 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-31 21:39:10 +00:00
David L Parkhurst
099e2fe058 length argument needed for callback. 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9435 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-30 18:38:56 +00:00
David L Parkhurst
28e2eefe78 Working on IPhreeqc Basic callback. Compiles with ISO_C_BINDING, but may need some more debugging. 
Need to merge this change with PhreeqcRM-trunk.

git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9424 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-27 22:03:36 +00:00
Scott R Charlton
4719145a03 changed NO_IPHREEQC_FORTRAN_MODULE to IPHREEQC_NO_FORTRAN_MODULE 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9376 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-18 06:26:07 +00:00
Scott R Charlton
9db51aae38 working fortran 2003 builds 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9369 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-17 03:15:22 +00:00
Scott R Charlton
68cb2cc5e5 working on fortran/test integration 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9360 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-14 01:17:56 +00:00
David L Parkhurst
21b38a9779 removed FC_FUNC from IPhreeqc_interface_F.h, fixed padfstring to use int sofar 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9357 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-13 18:34:10 +00:00
David L Parkhurst
1709dc7c2b Tested all phast3 configurations on ex4. 
Changed default logic to write xyz only for count_chem cells.
   If NEW_STYLE_XYZ is defined, then xyz file contains nxyz cells.

write2_2.f90 changed to USE IPhreeqc
write5.f90 changed to USE IPhreeqc

TestRM advection_f90.F90 changed to USE IPhreeqc
TestRM species_f90.F90 changed to USE IPhreeqc

FortranAdvect.vfproj: IPhreeqc.f90.inc removed and IPhreeqc_interface.F90 added.

PhreeqcRM.vcxproj, PhreeqcRM.vcxproj.filters: fwrap files removed and IPhreeqc_interface_F.cpp added

phast3.vcxproj: added or corrected postbuild copy of zlib1, hdf5dll, and szlibdll.dll.
   removed OLD_STYLE_XYZ (logically it is now the default for xyz file).
   removed dead preprocessor definitions PHREEQC_CPP, MERGE_FILES, GZIP_RESTART, OMPI_IMPORTS

phastf.vfproj: removed IPhreeqc.f90.inc added IPhreeqc_interface.F90.

fwrap files are compiled if #ifdef IPHREEQC_NO_FORTRAN_MODULE

IPhreeqc_interface.F90 compiled if #ifndef IPHREEQC_NO_FORTRAN_MODULE
   fixed bug intent(inout) should have been intent(in) (constant character argument).
   fixed interfaces for SetBasicFortranCallback

IPhreeqc_interface_F.cpp compiled if #ifndef IPHREEQC_NO_FORTRAN_MODULE

git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9356 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-13 16:40:25 +00:00
Scott R Charlton
3770b76f8c updated for PhreeqcKeywords 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9355 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-13 06:14:19 +00:00
David L Parkhurst
92f0ac92aa Made IPhreeqc a Fortran module when IPHREEQC_MODULE is defined. 
fwrap routines are used if IPHREEQC_MODULE is not defined.
If IPHREEQC_MODULE is defined, then IPhreeqc_interface.F90 defines the Fortran Module.
    compile it with the user Fortran code.
IPhreeqc_interface_F.cpp is a modification of fwrap.cpp, which the Fortran Module functions call.
IPhreeqc_interface_F.h is a modification of fwrap.h used only by IPhreeqc_interface_F.cpp.

git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9347 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-03-11 16:18:41 +00:00
Scott R Charlton
6db24c4ddf changed the following in order to pass make check on linux 
#ifdef _DEBUG
  this->OutputFileOn = false;
#endif

to

#if !defined(NDEBUG)
  this->OutputFileOn = false;
#endif



git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9292 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-02-20 05:49:48 +00:00
David L Parkhurst
9e8433dd5b cast size_t to (unsinged int) 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9262 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-02-10 22:57:14 +00:00
Scott R Charlton
d67163bf5e reformatted for linux 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9204 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-01-27 04:22:10 +00:00
Scott R Charlton
f87ea6d4b9 fixed f2cstring error that occurred when given an empty string 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9203 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-01-27 01:59:34 +00:00
Scott R Charlton
19075d934b added fimpl.h to dist 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9191 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2015-01-21 03:24:27 +00:00
Scott R Charlton
8fc13dc64e removed vs2008 directory and props 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9144 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-12-20 06:30:17 +00:00
David L Parkhurst
9afb670e92 working on vs2008 soln/projs 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9143 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-12-20 00:07:41 +00:00
David L Parkhurst
a2218b7842 Fixed Linux errors 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9140 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-12-19 17:58:29 +00:00
Scott R Charlton
90487d6329 added fwrap1.cpp to Makefile.am 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9052 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-11-07 06:03:19 +00:00
Scott R Charlton
7cb29335e3 minor reformatting; added some ignore directories; added missing RMimpl.h 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9033 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-11-03 23:44:04 +00:00
Scott R Charlton
bb774d3e77 seems that having padfstring receiving unsigned int fixes gfortran x64 problem 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9027 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-10-31 04:54:01 +00:00
David L Parkhurst
e7eacdd09c Made native 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9024 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-10-30 22:00:37 +00:00
Scott R Charlton
9a6cb18dbf changed all fortran string length parameters to be size_t 
simplified fortran wrappers for windows


git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@9015 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-10-29 01:59:37 +00:00
Scott R Charlton
5bd2cae399 made catch(...) always rethrow; 
changed catches to const references


git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8905 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-08-05 02:42:09 +00:00
Scott R Charlton
b3cff55ac9 set but not used 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8826 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-07-09 23:52:45 +00:00
Scott R Charlton
1ebd3748b5 updated for R defines 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8697 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-05-01 04:26:23 +00:00
Scott R Charlton
9eaeda6783 cleaned up some signed/unsigned comparison warnings 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8696 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-05-01 04:22:46 +00:00
Scott R Charlton
260e385b9f removed unused buffer 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8695 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-05-01 04:22:08 +00:00
Scott R Charlton
9a3efd2351 changes req'd for R 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8685 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-29 23:29:30 +00:00
Scott R Charlton
d8f65736b0 fixed problem with formatting size_t 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8683 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-29 21:38:45 +00:00
Scott R Charlton
071f82574d fixed problem with formatting size_t 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8680 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-29 21:22:09 +00:00
Scott R Charlton
926615523e added this specifiers 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8679 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-29 04:53:42 +00:00
Scott R Charlton
cc2b4466d2 fixed typo 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8638 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-08 23:32:13 +00:00
Scott R Charlton
d7de17c703 first pass @ removing std::cerr, std::cout, exit, stderr, stdout from R version. 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8619 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-04-05 04:14:16 +00:00
Scott R Charlton
66fc23c0cb AccumulatedLines are now cleared after LoadDatabase/LoadDatabaseString/RunFile/RunString. 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8583 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-03-20 05:55:57 +00:00
Scott R Charlton
08d375a3c9 Fixes error that occurs when using the DATABASE keyword with multiple calls RunAccumulated 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8574 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-03-19 06:26:46 +00:00
Scott R Charlton
f03c453eb4 passes all unit tests on windows 
git-svn-id: svn://136.177.114.72/svn_GW/IPhreeqc/trunk@8506 1feff8c3-07ed-0310-ac33-dd36852eb9cd
 2014-02-20 07:19:05 +00:00