David L Parkhurst 2b11772777 Rewrote run_cells to do all of the calculations that would be ...

done if a series of USE and SAVE.

Modified the logic when time step is defined in run_cells. Equivalent to time_step in nmax steps, where nmax is max steps
in kinetics, reaction, reaction_temperature.

Wrote dump for chart and chart_handler. chart_handler calls dump for all user_graph.

Fixed bug in chart_object with log definition. Had wrong logic when looking for t/T/l/L.

initial_total_time initialized twice in mainsubs and twice in phreeqc.cpp.

Fixed heading logic for mixing graph_x, graph_y, graph_sy with plot_xy.

Moved NA to header file.


git-svn-id: svn://136.177.114.72/svn_GW/phreeqcpp/trunk@5431 1feff8c3-07ed-0310-ac33-dd36852eb9cd

2011-06-10 22:00:46 +00:00

ChartHandler.cpp

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

ChartHandler.h

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

ChartObject.cpp

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

ChartObject.h

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

class_main.cpp

Redid include as include$.

2010-12-21 17:24:00 +00:00

CurveObject.cpp

merged MULTICHART branch back to trunk

2011-05-04 00:24:40 +00:00

CurveObject.h

merged MULTICHART branch back to trunk

2011-05-04 00:24:40 +00:00

cxxKinetics.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

cxxKinetics.h

added equal_steps to cxxKinetics. Had not implemented the "in steps" option for the Kinetics class.

2010-09-23 21:31:35 +00:00

cxxMix.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

cxxMix.h

Added options to the UNITS keyword to allow moles of solid

2009-12-21 20:36:36 +00:00

Dictionary.cxx

merged 3750-3846 of plusify; system.cxx and system.h need to be formated

2009-12-03 01:49:56 +00:00

Dictionary.h

merged 3750-3846 of plusify; system.cxx and system.h need to be formated

2009-12-03 01:49:56 +00:00

distribution.checklist

Copying new classes (cxx) and cpp files to src

2006-02-16 00:21:39 +00:00

dumper.cpp

Added some identifier synonyms for DUMP and DELETE.

2010-09-20 22:59:32 +00:00

dumper.h

Added -mix, -reaction, -temperature, -cells to DUMP.

2010-09-08 20:33:43 +00:00

Exchange.cxx

exchange_modify, recalculate formula_totals after redefinition.

2010-09-22 17:17:38 +00:00

Exchange.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

ExchComp.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

ExchComp.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

GasPhase.cxx

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

GasPhase.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

ISolution.cxx

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

ISolution.h

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

ISolutionComp.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

ISolutionComp.h

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

KineticsComp.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

KineticsComp.h

Bugs with kinetics in PHAST.

2010-01-14 16:26:14 +00:00

Makefile

Added ndiff option

2011-02-18 01:17:54 +00:00

NameDouble.cxx

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

NameDouble.h

Bugs with kinetics in PHAST.

2010-01-14 16:26:14 +00:00

NumKeyword.cxx

Cleaned up header files to remove unnecessary includes of .h files. Moved includes to source code where possible.

2009-12-07 19:49:38 +00:00

NumKeyword.h

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

Parser.cxx

Added example 20 to examples.fm.

2011-05-18 19:02:35 +00:00

Parser.h

merged MULTICHART branch back to trunk

2011-05-04 00:24:40 +00:00

phast.xsd

eol

2009-12-03 01:06:34 +00:00

Phreeqc_class.h

merged MULTICHART branch back to trunk

2011-05-04 00:24:40 +00:00

Phreeqc.cpp

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

phreeqc.dat

Copying new classes (cxx) and cpp files to src

2006-02-16 00:21:39 +00:00

Phreeqc.h

merged MULTICHART branch back to trunk

2011-05-04 00:24:40 +00:00

phreeqc.rev

Copying new classes (cxx) and cpp files to src

2006-02-16 00:21:39 +00:00

PHREEQCPP-RELEASE.txt

Added version/date replacement strings

2011-03-31 23:17:32 +00:00

PPassemblage.cxx

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

PPassemblage.h

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

PPassemblageComp.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

PPassemblageComp.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

Reaction.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

Reaction.h

Through REACTION_MODIFY and REACTION_RAW.

2010-09-30 22:18:39 +00:00

ReadClass.cxx

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

runner.cpp

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

runner.h

Rewrote run_cells to do all of the calculations that would be

2011-06-10 22:00:46 +00:00

Solution.cxx

Fixed adjustments of activities after solution_modify. Better treatment of redox states; bug in get_total_element.

2011-03-31 17:15:59 +00:00

Solution.h

Added code to adjust activities of master species in solution when totals are adjusted by SOLUTION_MODIFY.

2011-03-30 19:21:36 +00:00

SolutionIsotope.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

SolutionIsotope.h

Slowly adding arguments and qualifiers to pass phreeqc class instance to routines that need it.

2009-12-08 00:56:50 +00:00

SolutionIsotopeList.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

SolutionIsotopeList.h

Slowly adding arguments and qualifiers to pass phreeqc class instance to routines that need it.

2009-12-08 00:56:50 +00:00

SSassemblage.cxx

Initialized solid solution in read.c

2010-10-07 18:21:52 +00:00

SSassemblage.h

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

SSassemblageSS.cxx

Initialized solid solution in read.c

2010-10-07 18:21:52 +00:00

SSassemblageSS.h

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

StorageBin.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

StorageBin.h

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

StorageBinList.cpp

Added some identifier synonyms for DUMP and DELETE.

2010-09-20 22:59:32 +00:00

StorageBinList.h

Added -mix, -reaction, -temperature, -cells to DUMP.

2010-09-08 20:33:43 +00:00

Surface.cxx

Redid modifications for hidden variables using l_ prefix.

2010-07-21 00:18:01 +00:00

Surface.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

SurfaceCharge.cxx

Compiles as class, debug, and Release.

2009-12-08 22:12:42 +00:00

SurfaceCharge.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

SurfaceComp.cxx

Fixed Makefile on Linux to make class version.

2009-12-08 23:58:06 +00:00

SurfaceComp.h

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

System.cxx

Made all the changes to add phreeqc pointer as argument to

2009-12-08 18:09:39 +00:00

System.h

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

Temperature.cxx

Added some LDBLE, particularly for pow().

2011-04-14 21:22:09 +00:00

Temperature.h

Slowly adding arguments and qualifiers to pass phreeqc class instance to routines that need it.

2009-12-08 00:56:50 +00:00

test.xml

eol

2009-12-03 01:06:34 +00:00

Utils.cxx

Latest output for test cases.

2011-05-12 20:36:33 +00:00

Utils.h

merged 3750-3846 of plusify; system.cxx and system.h need to be formated

2009-12-03 01:49:56 +00:00

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