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David L Parkhurst 8609b3dfb2 Added row ntally_row + 1 that contains the moles of each reactant. 
git-svn-id: svn://136.177.114.72/svn_GW/phreeqc3/trunk@7898 1feff8c3-07ed-0310-ac33-dd36852eb9cd
2013-08-08 21:17:07 +00:00
advection.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
basicsubs.cpp
functions are fcn
2013-08-08 19:53:31 +00:00
chart_icon.gif
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
ChartHandler.cpp
Flushing error file.
2012-12-31 16:21:17 +00:00
ChartHandler.h
Added active_charts to ChartHandler.
2012-12-20 23:22:16 +00:00
ChartObject.cpp
fixed all System::Threading::Interlocked::CompareExchange and added some debugging code
2012-12-13 22:20:53 +00:00
ChartObject.h
Added second logical in batch. First is color, second is grid.
2012-08-01 20:03:47 +00:00
cl1.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
cl1mp.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
class_main.cpp
vcxproj has some change.
2013-05-29 19:56:14 +00:00
CurveObject.cpp
fixed all System::Threading::Interlocked::CompareExchange and added some debugging code
2012-12-13 22:20:53 +00:00
CurveObject.h
Merged ErrorHandling 6119-6268 changes.
2012-03-06 23:42:49 +00:00
cvdense.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
cvdense.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
cvode.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
cvode.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
cxxKinetics.cxx
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
cxxKinetics.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
cxxMix.cxx
const static vopts
2012-07-17 17:12:50 +00:00
cxxMix.h
const static vopts
2012-07-17 17:12:50 +00:00
dense.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
dense.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
distribution.checklist
Copying new classes (cxx) and cpp files to src
2006-02-16 00:21:39 +00:00
distribution.mk
working on 3.0 dist
2013-01-15 21:46:19 +00:00
dumper.cpp
const static vopts
2012-07-17 17:12:50 +00:00
dumper.h
added Set_append
2013-05-31 05:39:52 +00:00
dw.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
Exchange.cxx
Saved list of newly read entities (including _raw and _modify).
2012-12-18 16:36:06 +00:00
Exchange.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
ExchComp.cxx
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
ExchComp.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
Form1.h
Cleaning up code.
2013-05-14 20:15:31 +00:00
Form1.resX
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
GasComp.cxx
const static vopts
2012-07-17 17:12:50 +00:00
GasComp.h
const static vopts
2012-07-17 17:12:50 +00:00
gases.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
GasPhase.cxx
new def removed for raw Gas Phase and Surface.
2012-11-15 17:13:43 +00:00
GasPhase.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
global_structures.h
replaced Find with pp_assemblage_comp_ptr stored in struct unknown
2013-05-16 17:58:27 +00:00
input.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
integrate.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
inverse.cpp
skip inverse in no inverse defined.
2013-05-15 19:51:34 +00:00
ISolution.cxx
Removed Phreeqc_class.h.
2012-04-19 18:35:14 +00:00
ISolution.h
Default_pe is now const char *, saves some string_hsave in clear in prep.
2013-05-15 20:46:20 +00:00
ISolutionComp.cxx
Removed Phreeqc_class.h.
2012-04-19 18:35:14 +00:00
ISolutionComp.h
updated for linux (added headers)
2012-04-20 05:18:15 +00:00
isotopes.cpp
Isotopes moles and molalities were not correct when mass of water was not equal to 1.
2013-06-11 16:51:20 +00:00
Keywords.cpp
Fixed bugs with mixing calculations (keywords not set up right).
2012-07-24 18:19:29 +00:00
Keywords.h
Added new keywords to mix SOLUTION, EXCHANGE, GAS_PHASE, KINETICS, EQUILIBRIUM_PHASES, SOLID_SOLUTIONS, SURFACE
2012-07-24 16:51:26 +00:00
kinetics.cpp
Added new Basic function kin_time, which is the time interval for the current kinetic integration.
2013-05-01 16:14:16 +00:00
KineticsComp.cxx
LDBLE fix
2013-04-01 22:33:12 +00:00
KineticsComp.h
Added logic for rate limiter, but not used.
2013-04-30 16:41:40 +00:00
mainsubs.cpp
vcxproj has some change.
2013-05-29 19:56:14 +00:00
Makefile
added NOTICE to configure
2013-01-30 04:52:41 +00:00
Makefile.am
modified source files for rearranged directories
2013-01-11 01:05:51 +00:00
model.cpp
latest tests 7837; some Linux warnings in src
2013-07-17 21:52:44 +00:00
NA.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
NameDouble.cxx
NameDouble dump failed with string greater than 21 characters.
2013-04-02 20:05:34 +00:00
NameDouble.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
newiso.dat
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
NumKeyword.cxx
Allow negative numbers on entity mixes.
2012-07-24 18:52:15 +00:00
NumKeyword.h
Merged ErrorHandling 6119-6268 changes.
2012-03-06 23:42:49 +00:00
nvector_serial.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
nvector_serial.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
nvector.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
nvector.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
parse.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
Parser.cxx
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
Parser.h
has _DEBUG #defines for extended ascii/ANSI character set to avoid assert.
2013-02-07 16:08:13 +00:00
PBasic.cpp
Added a Fortran callback.
2013-08-05 18:56:31 +00:00
PBasic.h
Added a Fortran callback.
2013-08-05 18:56:31 +00:00
phast.xsd
eol
2009-12-03 01:06:34 +00:00
phqalloc.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
phqalloc.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
Phreeqc.cpp
functions are fcn
2013-08-08 19:53:31 +00:00
phreeqc.dat
Copying new classes (cxx) and cpp files to src
2006-02-16 00:21:39 +00:00
phreeqc.distribution.checklist
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
Phreeqc.h
functions are fcn
2013-08-08 19:53:31 +00:00
phreeqc.Makefile
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
phreeqc.rev
Copying new classes (cxx) and cpp files to src
2006-02-16 00:21:39 +00:00
phreex.ico
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
PHRQ_base.cxx
gas_phase and irrev removed.
2012-01-04 16:07:40 +00:00
PHRQ_base.h
roughed in cxxPressure class. A lot more to do.
2011-11-30 16:50:52 +00:00
PHRQ_io_output.cpp
vcxproj has some change.
2013-05-29 19:56:14 +00:00
PHRQ_io.cpp
fixed checks for successful opening of std::ofstream
2013-04-30 04:38:05 +00:00
PHRQ_io.h
fixed checks for successful opening of std::ofstream
2013-04-30 04:38:05 +00:00
phrqtype.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
pitzer_structures.cpp
Working on Phreeqc copy
2013-02-07 22:07:33 +00:00
pitzer.cpp
Tony cleaned up XI in Pitzer.
2013-07-23 14:52:33 +00:00
PPassemblage.cxx
added pointers for solid solution and ss component in unknown struct to speed calculations, all test cases run
2013-05-16 20:42:28 +00:00
PPassemblage.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
PPassemblageComp.cxx
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
PPassemblageComp.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
prep.cpp
latest tests 7837; some Linux warnings in src
2013-07-17 21:52:44 +00:00
Pressure.cxx
const static vopts
2012-07-17 17:12:50 +00:00
Pressure.h
added const version of Get_pressures;
2012-07-27 07:32:09 +00:00
print.cpp
Tony's wording for fugacity
2013-08-08 19:54:14 +00:00
Reaction.cxx
const static vopts
2012-07-17 17:12:50 +00:00
Reaction.h
const static vopts
2012-07-17 17:12:50 +00:00
read.cpp
Default_pe is now const char *, saves some string_hsave in clear in prep.
2013-05-15 20:46:20 +00:00
ReadClass.cxx
changed read_delete to reuse StorageBinList for each call
2012-11-09 03:55:10 +00:00
readtr.cpp
fixed checks for successful opening of std::ofstream
2013-04-30 04:38:05 +00:00
runner.cpp
const static vopts
2012-07-17 17:12:50 +00:00
runner.h
added Setters for time params
2013-03-07 05:42:24 +00:00
sit.cpp
Tony's fixes for Pitzer, High Pressure is still not right,
2013-07-23 14:51:26 +00:00
smalldense.cpp
Tony's changes for gases.
2013-04-26 16:57:25 +00:00
smalldense.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
Solution.cxx
Fixed missing -pressure in solution dump_raw and read_raw.
2013-07-31 23:22:25 +00:00
Solution.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SolutionIsotope.cxx
const static vopts
2012-07-17 17:12:50 +00:00
SolutionIsotope.h
const static vopts
2012-07-17 17:12:50 +00:00
spread.cpp
Default_pe is now const char *, saves some string_hsave in clear in prep.
2013-05-15 20:46:20 +00:00
SS.cxx
LDBLEs
2013-03-29 17:42:27 +00:00
SS.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SSassemblage.cxx
more testing of copy operator.
2013-02-11 19:04:35 +00:00
SSassemblage.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SScomp.cxx
LDBLE for SScomp
2013-04-03 22:06:01 +00:00
SScomp.h
LDBLE for SScomp
2013-04-03 22:06:01 +00:00
step.cpp
ah2o_x should be set to zero. ah2o is then summed from solution or mix.
2013-03-29 19:47:01 +00:00
StorageBin.cxx
Working on REVISED_CVODE ifdef.
2013-04-04 19:41:26 +00:00
StorageBin.h
Working on REVISED_CVODE ifdef.
2013-04-04 19:41:26 +00:00
StorageBinList.cpp
fixed bug in DELETE reported by laurin.wissmeier@web.de 2013-06-01
2013-06-03 22:05:52 +00:00
StorageBinList.h
added some const and added cell for use in phreeqci
2013-05-29 23:38:00 +00:00
structures.cpp
added pointers for solid solution and ss component in unknown struct to speed calculations, all test cases run
2013-05-16 20:42:28 +00:00
sundialsmath.cpp
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
sundialsmath.h
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
sundialstypes.h
LDBLE for SScomp
2013-04-03 22:06:01 +00:00
Surface.cxx
new def removed for raw Gas Phase and Surface.
2012-11-15 17:13:43 +00:00
Surface.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SurfaceCharge.cxx
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SurfaceCharge.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SurfaceComp.cxx
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
SurfaceComp.h
PHREEQC should now have no USE_MPI
2012-10-29 23:16:27 +00:00
System.cxx
Removed Phreeqc_class.h.
2012-04-19 18:35:14 +00:00
System.h
Removed Phreeqc_class.h.
2012-04-19 18:35:14 +00:00
tally.cpp
Added row ntally_row + 1 that contains the moles of each reactant.
2013-08-08 21:17:07 +00:00
Temperature.cxx
const static vopts
2012-07-17 17:12:50 +00:00
Temperature.h
const static vopts
2012-07-17 17:12:50 +00:00
test.xml
eol
2009-12-03 01:06:34 +00:00
tidy.cpp
Caught SS definition errors if 2 components not defined.
2013-07-26 22:36:39 +00:00
transport.cpp
Tony's changes to the status timer.
2013-02-04 19:25:05 +00:00
Use.cpp
Linux Makefile
2012-01-11 16:46:37 +00:00
Use.h
Merged ErrorHandling 6119-6268 changes.
2012-03-06 23:42:49 +00:00
utilities.cpp
Tony's fixes for Pitzer, High Pressure is still not right,
2013-07-23 14:51:26 +00:00
Utils.cxx
LDBLEs
2013-03-29 17:42:27 +00:00
Utils.h
LDBLEs
2013-03-29 17:42:27 +00:00
ZedGraph.dll
moved phreeqc files into src
2013-01-10 06:04:12 +00:00
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C++ 81.6%
Makefile 9.2%
C 4.8%
Fortran 1.8%
R 1%
Other 1.3%