mirror of
https://git.gfz-potsdam.de/naaice/iphreeqc.git
synced 2025-12-15 16:18:22 +01:00
545 lines
18 KiB
YAML
545 lines
18 KiB
YAML
# name: CMake
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#
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# on:
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# push:
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#
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# pull_request:
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# branches:
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# - master
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#
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# schedule:
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# - cron: '15 14 4,11,18,25 * *'
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#
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# workflow_dispatch:
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#
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# env:
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# # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.)
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# BUILD_TYPE: Release
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# NAME: IPhreeqc
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#
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# jobs:
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#
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# init:
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# runs-on: ubuntu-latest
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# # Map step outputs to job outputs
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# outputs:
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# VER: ${{ steps.vars.outputs.VER }}
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# REL: ${{ steps.vars.outputs.REL }}
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# DATE: ${{ steps.vars.outputs.DATE }}
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# DATE_RFC_3339: ${{ steps.vars.outputs.DATE_RFC_3339 }}
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# steps:
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# - name: Setup vars
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# id: vars
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# run: |
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# echo VER=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/next_ver.sh | sh) >> $GITHUB_OUTPUT
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# echo REL=$(curl -sS https://raw.githubusercontent.com/usgs-coupled/phreeqc-version/main/rel.py | python3) >> $GITHUB_OUTPUT
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# echo DATE=$(date "+%x") >> $GITHUB_OUTPUT
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# echo DATE_RFC_3339=$(date --rfc-3339=date) >> $GITHUB_OUTPUT
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#
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#
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# test:
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# strategy:
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# fail-fast: false
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# matrix:
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# os: [macos-latest, ubuntu-latest, windows-latest]
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#
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# runs-on: ${{ matrix.os }}
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# env:
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# BUILD_DIR: _ctest # set in ctest.cmake
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#
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# steps:
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# - uses: actions/checkout@v4
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#
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# - name: Install ninja valgrind (Linux)
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# if: runner.os == 'Linux'
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# run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
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#
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# - name: Install ninja (macOS)
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# if: runner.os == 'macOS'
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# run: brew install ninja
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#
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# - name: Set up Visual Studio shell (Windows)
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# if: runner.os == 'Windows'
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# uses: egor-tensin/vs-shell@v2
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# with:
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# arch: x64
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#
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# - name: CTest
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# run: ctest -S ctest.cmake -V --output-on-failure --timeout 900
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#
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# - name: Upload results
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# uses: actions/upload-artifact@v4
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# with:
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# name: ${{ matrix.os }}-${{ github.job }}-results
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# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
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#
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# test-shared:
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# strategy:
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# fail-fast: false
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# matrix:
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# os: [macos-latest, ubuntu-latest, windows-latest]
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#
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# runs-on: ${{ matrix.os }}
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# env:
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# BUILD_DIR: _ctest_shared # set in ctest-shared.cmake
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#
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# steps:
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# - uses: actions/checkout@v4
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#
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# - name: Install ninja valgrind (Linux)
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# if: runner.os == 'Linux'
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# run: sudo apt-get update && sudo apt-get install -y ninja-build valgrind
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#
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# - name: Install ninja (macOS)
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# if: runner.os == 'macOS'
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# run: brew install ninja
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#
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# - name: Set up Visual Studio shell (Windows)
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# if: runner.os == 'Windows'
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# uses: egor-tensin/vs-shell@v2
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# with:
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# arch: x64
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#
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# - name: CTest
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# run: ctest -S ctest-shared.cmake -V --output-on-failure --timeout 900
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#
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# - name: Upload results
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# uses: actions/upload-artifact@v4
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# with:
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# name: ${{ matrix.os }}-${{ github.job }}-results
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# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
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#
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# test-clang:
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# strategy:
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# fail-fast: false
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# matrix:
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# os: [macos-latest, ubuntu-latest, windows-latest]
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# shared_libs: [OFF, ON]
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# enable_module: [OFF, ON]
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#
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# runs-on: ${{ matrix.os }}
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# env:
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# BUILD_DIR: _build
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#
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# steps:
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# - uses: actions/checkout@v4
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#
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# - name: Install ninja valgrind (Linux)
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# if: runner.os == 'Linux'
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# run: sudo apt-get update && sudo apt-get install -y ninja-build clang valgrind
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#
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# - name: Install ninja (macOS)
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# if: runner.os == 'macOS'
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# run: brew install ninja
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#
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# - name: Set up Visual Studio shell (Windows)
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# if: runner.os == 'Windows'
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# uses: egor-tensin/vs-shell@v2
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# with:
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# arch: x64
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#
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# - name: CMake configure
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# if: runner.os == 'Linux'
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# run: CC=clang CXX=clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
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#
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# - name: CMake configure
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# if: runner.os == 'macOS'
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# run: CC=$(brew --prefix llvm@15)/bin/clang CXX=$(brew --prefix llvm@15)/bin/clang++ cmake -B ${{ env.BUILD_DIR }} -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
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#
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# - name: CMake configure
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# if: runner.os == 'Windows'
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# run: cmake -B ${{ env.BUILD_DIR }} -A x64 -T "ClangCL" -DBUILD_SHARED_LIBS=${{ matrix.shared_libs }} -DIPHREEQC_ENABLE_MODULE=${{ matrix.enable_module }} -DCMAKE_CXX_STANDARD=20 -DCMAKE_CXX_STANDARD_REQUIRED=ON
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#
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# - name: CMake build
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# run: cmake --build ${{ env.BUILD_DIR }}
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#
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# - name: CTest
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# run: ctest --test-dir ${{ env.BUILD_DIR }}
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#
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# - name: Upload results
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# uses: actions/upload-artifact@v4
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# with:
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# name: ${{ matrix.os }}-${{ github.job }}-SHARED=${{ matrix.shared_libs }}-MODULE=${{ matrix.enable_module }}-results
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# path: ${{ github.workspace }}/${{ env.BUILD_DIR }}/Testing/
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#
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# chm:
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# runs-on: windows-latest
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#
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# steps:
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# - name: Checkout phreeqc3-HTMLversion
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# uses: actions/checkout@v4
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# with:
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# repository: usgs-coupled-subtrees/phreeqc3-HTMLversion
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# ref: master
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#
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# - name: cache htmlhelp
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# id: cache-htmlhelp
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# uses: actions/cache@v4
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# with:
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# path: "C:/Program Files (x86)/HTML Help Workshop"
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# key: ${{ runner.os }}-htmlhelp
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#
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# - name: install htmlhelp
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# if: steps.cache-htmlhelp.outputs.cache-hit != 'true'
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# timeout-minutes: 5
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# run: |
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# curl -L -O --max-time 120 http://web.archive.org/web/20160201063255/http://download.microsoft.com/download/0/A/9/0A939EF6-E31C-430F-A3DF-DFAE7960D564/htmlhelp.exe
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# cmd /c start /wait .\htmlhelp.exe /q /c /t:$(Get-Location)\tmp
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# $file = "$(Get-Location)\tmp\htmlhelp.inf"
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# (Get-Content $file) | Foreach-Object { $_ `
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# -replace '^BeginPrompt', ';;BeginPrompt' `
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# -replace '^EndPrompt', ';;EndPrompt' `
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# -replace '^49000=CustomLDID49000, 1', '49000=CustomLDID49000, 5' `
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# -replace '^"hhupd.exe', ';;hhupd.exe' `
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# -replace '^DefaultInstallDir="C:\\Program Files\\HTML Help Workshop"', 'DefaultInstallDir="%ProgramFiles%\\HTML Help Workshop"'
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# } | Set-Content $file
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# cmd /c start /wait .\tmp\setup.exe
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# Remove-Item -Recurse -Force .\tmp
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# Remove-Item -Recurse -Force .\htmlhelp.exe
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# # the next line doesn't seem to work (supposed to set the path)
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# # echo 'C:\Program Files (x86)\HTML Help Workshop' >> $GITHUB_PATH
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#
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# - name: compile chm
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# shell: bash
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# run: |
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# pushd HTML
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# bash fixup_html.bash
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# popd
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# # hhc returns 1 on success
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# set +e
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# 'C:\Program Files (x86)\HTML Help Workshop\hhc' phreeqc3.hhp | tee hhc.out
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# status=${PIPESTATUS[0]}
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# set -e
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# if [ "$status" -eq 1 ]; then
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# echo "[OK]"
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# exit 0
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# else
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# echo "[FAILED]"
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# exit 1
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# fi
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#
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# - uses: actions/upload-artifact@v4
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# with:
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# name: chm
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# path: ${{github.workspace}}/phreeqc3.chm
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#
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#
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# R-CMD-check:
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# needs: [init]
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# runs-on: ${{ matrix.config.os }}
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#
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# name: ${{ matrix.config.os }} (${{ matrix.config.r }})
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#
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# strategy:
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# fail-fast: false
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# matrix:
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# config:
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# - {os: macos-latest, r: 'release'}
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# - {os: windows-latest, r: 'release'}
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# - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
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# - {os: ubuntu-latest, r: 'release'}
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# - {os: ubuntu-latest, r: 'oldrel-1'}
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#
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# steps:
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# - uses: actions/checkout@v4
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#
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# - name: versioning
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# run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
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#
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# - name: Setup R
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# uses: r-lib/actions/setup-r@v2
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# with:
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# r-version: ${{ matrix.config.r }}
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# http-user-agent: ${{ matrix.config.http-user-agent }}
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# use-public-rspm: true
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#
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# - name: create source
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# working-directory: R
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# run: make VERSION=${{ needs.init.outputs.VER }} RELEASE_DATE=${{ needs.init.outputs.DATE_RFC_3339 }} source
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#
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# - name: Install dependencies
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# uses: r-lib/actions/setup-r-dependencies@v2
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# with:
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# extra-packages: any::roxygen2, any::pkgbuild, any::rcmdcheck
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# needs: roxygen2, pkgbuild, check
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# working-directory: R/phreeqc
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#
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# - name: Display sessionInfo()
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# run: sessionInfo()
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# working-directory: R/phreeqc
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# shell: Rscript {0}
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#
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# - name: roxygen2::roxygenise()
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# run: roxygen2::roxygenise()
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# working-directory: R/phreeqc
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# shell: Rscript {0}
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#
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# - name: Check
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# uses: r-lib/actions/check-r-package@v2
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# with:
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# working-directory: R/phreeqc
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#
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# - name: List files
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# if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
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# run: |
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# pwd
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# ls -lR
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# find -name "*.tar.gz"
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#
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# - uses: actions/upload-artifact@v4
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# if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release'
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# with:
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# name: cran
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# path: ${{ github.workspace }}/R/phreeqc/check/phreeqc_*.tar.gz
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# r-build:
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# needs: [init]
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# runs-on: ubuntu-latest
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# steps:
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# - uses: actions/checkout@v4
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# - uses: r-lib/actions/setup-r@v2
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# with:
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# use-public-rspm: true
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# - name: install devtools
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# run: Rscript -e 'install.packages("devtools")'
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# - name: install curl
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# run: Rscript -e 'install.packages("curl")'
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# - name: versioning
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# run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
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# - name: setup clang
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# run: |
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# mkdir -p ~/.R
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# echo CC=clang -Qunused-arguments > ~/.R/Makevars
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# echo CXX=clang++ -Qunused-arguments >> ~/.R/Makevars
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# - name: check
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# run: cd R && make VERSION=${{ needs.init.outputs.VER }} check_built
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# - uses: actions/upload-artifact@v4
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# with:
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# name: cran
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# path: ${{github.workspace}}/R/phreeqc_*.tar.gz
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# r-valgrind:
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# needs: [r-build]
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# runs-on: ubuntu-latest
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# steps:
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# - uses: actions/checkout@v4
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# - uses: actions/download-artifact@v4
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# with:
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# name: cran
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# path: R
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# - name: Display structure of downloaded files
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# working-directory: R
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# run: ls -lR
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# - uses: r-lib/actions/setup-r@v2
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# with:
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# use-public-rspm: true
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# - name: install devtools
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# run: Rscript -e 'install.packages("devtools")'
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# - name: install curl
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# run: Rscript -e 'install.packages("curl")'
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# - name: install valgrind
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# run: sudo apt-get install -y valgrind
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# - name: setup clang
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# run: |
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# mkdir -p ~/.R
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# echo CC=clang -Qunused-arguments > ~/.R/Makevars
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# echo CXX=clang++ -Qunused-arguments >> ~/.R/Makevars
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# - name: install
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# run: cd R && R CMD INSTALL --build phreeqc_*.tar.gz
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# - name: run
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# run: cd R && R -d "valgrind --tool=memcheck --leak-check=full" --vanilla < valgrind.R 2>&1 | tee valgrind.full.out
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# - uses: actions/upload-artifact@v4
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# with:
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# name: valgrind
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# path: ${{github.workspace}}/R/valgrind.full.out
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# distcheck:
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# needs: [init, chm]
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# runs-on: ubuntu-latest
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# steps:
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# - uses: actions/checkout@v4
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#
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# - uses: actions/download-artifact@v4
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# with:
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# name: chm
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#
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# - name: mv chm
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# run: mv phreeqc3.chm doc/.
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#
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# - name: versioning
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# run: ./jenkins-dist.sh -v ${{ needs.init.outputs.VER }} -r ${{ needs.init.outputs.REL }} -d ${{ needs.init.outputs.DATE }}
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#
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# - name: doxygen
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# run: sudo apt-get install -y doxygen && cd doc && doxygen
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#
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# - name: autoreconf
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# run: autoreconf -fvi
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#
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# - name: mkdir
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# run: mkdir _build
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#
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# - name: configure
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# working-directory: ${{github.workspace}}/_build
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# run: ../configure --prefix=$(pwd)/INSTALL
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#
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# - name: make
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# working-directory: ${{github.workspace}}/_build
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# run: make -j2 distcheck
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#
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# - name: convert
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# run: |
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# sudo apt install -y dos2unix
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# native="
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# doc/Makefile \
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# doc/examples/AccumulateLine.c \
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# doc/examples/CreateIPhreeqc.c \
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# doc/examples/F90ClearAccumulatedLines.f90 \
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# doc/examples/F90CreateIPhreeqc.f90 \
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# doc/examples/F90DestroyIPhreeqc.f90 \
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# doc/examples/F90GetComponent.f90 \
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# doc/examples/F90GetDumpStringLine.f90 \
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# doc/examples/F90GetSelectedOutputValue.f90 \
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# doc/examples/F90GetVersionString.f90 \
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# doc/examples/GetComponent.c \
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# doc/examples/GetDumpString.c \
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# doc/examples/GetSelectedOutputValue.c \
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# doc/examples/GetVersionString.c \
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# doc/examples/IPhreeqc.cpp \
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# doc/examples/Makefile \
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# doc/examples/phreeqc.dat \
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# src/CSelectedOutput.cpp \
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# src/CSelectedOutput.hxx \
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# src/CVar.hxx \
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# src/Debug.h \
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# src/ErrorReporter.hxx \
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# src/IPhreeqc.cpp \
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# src/IPhreeqc.f.inc \
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# src/IPhreeqc.f90.inc \
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# src/IPhreeqc.h \
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# src/IPhreeqc.hpp \
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# src/IPhreeqcCallbacks.h \
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# src/IPhreeqcF.f \
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# src/IPhreeqcLib.cpp \
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# src/IPhreeqc_interface.F90 \
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# src/IPhreeqc_interface_F.cpp \
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# src/IPhreeqc_interface_F.h \
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# src/Var.c \
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# src/Var.h \
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# src/Version.h \
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# src/fimpl.h \
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# src/fwrap.cpp \
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# src/fwrap.h \
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# src/fwrap1.cpp \
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# src/fwrap2.cpp \
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# src/fwrap3.cpp \
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# src/fwrap4.cpp \
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# src/fwrap5.cpp \
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# src/fwrap6.cpp \
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# src/fwrap7.cpp \
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# src/fwrap8.cpp \
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# src/pp_sys.cpp \
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# src/thread.h \
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# test/llnl.dat \
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# test/phreeqc.dat \
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# test2/Makefile \
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# test2/wateq4f.dat \
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# test5/Makefile \
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# test5/phreeqc.dat \
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# test5/test5.c \
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# tests/main_fortran.cxx \
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# tests/test_c.c \
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# tests/test_cxx.cxx \
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# tests/test_f90.F90 \
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# unit/TestCVar.cpp \
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|
# unit/TestCVar.h \
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|
# unit/TestInterface.cpp \
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|
# unit/TestInterface.h \
|
|
# unit/TestSelectedOutput.cpp \
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|
# unit/TestSelectedOutput.h \
|
|
# unit/TestVar.cpp \
|
|
# unit/TestVar.h \
|
|
# unit/llnl.dat.old \
|
|
# unit/missing_e.dat \
|
|
# unit/phreeqc.dat.old \
|
|
# unit/unit.cpp"
|
|
# for f in ${native}; do
|
|
# unix2dos "${f}"
|
|
# done
|
|
#
|
|
# - name: dist-zip
|
|
# working-directory: ${{github.workspace}}/_build
|
|
# run: make dist-zip
|
|
#
|
|
# - name: copy
|
|
# run: cp doc/README IPhreeqc_ReadMe.txt
|
|
#
|
|
# - uses: actions/upload-artifact@v4
|
|
# with:
|
|
# name: readme
|
|
# path: ${{github.workspace}}/IPhreeqc_ReadMe.txt
|
|
#
|
|
# - uses: actions/upload-artifact@v4
|
|
# with:
|
|
# name: tarball
|
|
# path: ${{github.workspace}}/_build/*.tar.gz
|
|
#
|
|
# - uses: actions/upload-artifact@v4
|
|
# with:
|
|
# name: zipball
|
|
# path: ${{github.workspace}}/_build/*.zip
|
|
|
|
# build:
|
|
# needs: [init]
|
|
# # The CMake configure and build commands are platform agnostic and should work equally
|
|
# # well on Windows or Mac. You can convert this to a matrix build if you need
|
|
# # cross-platform coverage.
|
|
# # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix
|
|
# runs-on: windows-2019
|
|
|
|
# # Check all combinations of BUILD_SHARED_LIBS and BUILD_CLR_LIBS
|
|
# strategy:
|
|
# matrix:
|
|
# BUILD_SHARED_LIBS: [ON, OFF]
|
|
# BUILD_CLR_LIBS: [ON, OFF]
|
|
# exclude:
|
|
# - BUILD_SHARED_LIBS: OFF
|
|
# BUILD_CLR_LIBS: ON
|
|
|
|
# steps:
|
|
# - uses: actions/checkout@v4
|
|
|
|
# - name: Configure CMake
|
|
# # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make.
|
|
# # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type
|
|
# run: cmake -B ${{github.workspace}}/build -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} -DBUILD_SHARED_LIBS=${{matrix.BUILD_SHARED_LIBS}} -DBUILD_CLR_LIBS=${{matrix.BUILD_CLR_LIBS}}
|
|
|
|
# - name: Build
|
|
# # Build your program with the given configuration
|
|
# run: cmake --build ${{github.workspace}}/build --config ${{env.BUILD_TYPE}}
|
|
|
|
# - name: Test
|
|
# working-directory: ${{github.workspace}}/build
|
|
# # Execute tests defined by the CMake configuration.
|
|
# # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail
|
|
# run: ctest -C ${{env.BUILD_TYPE}}
|