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https://git.gfz-potsdam.de/naaice/iphreeqc.git
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1d5c59a175
git-subtree-dir: phreeqcpp git-subtree-mainline: ba5f2ba885b4cc757201e28f9b4dce158f7cc66b git-subtree-split: da9d06b423a87ed5eae503c0faf779ac11c96027
447 lines
11 KiB
C++
447 lines
11 KiB
C++
#ifdef _DEBUG
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#pragma warning(disable : 4786) // disable truncation warning (Only used by debugger)
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#endif
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#include <cassert>
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#include "Utils.h"
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#include "ISolutionComp.h"
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#include "Parser.h"
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#include "Solution.h"
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#include "phqalloc.h"
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cxxISolutionComp::cxxISolutionComp(PHRQ_io *io):
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PHRQ_base(io),
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moles(0.0),
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input_conc(0.0),
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phase_si(0.0),
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gfw(0.0)
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{
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}
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cxxISolutionComp::~cxxISolutionComp(void)
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{
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}
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#ifdef SKIP_OR_MOVE_TO_STRUCTURES
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struct conc *
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cxxISolutionComp::cxxISolutionComp2conc(Phreeqc * phreeqc_ptr, const std::map < std::string,
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cxxISolutionComp > &totals)
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// for ISolutions
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// takes a std::vector cxxISolutionComp structures
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// returns list of conc structures
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{
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struct conc *c;
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c = (struct conc *)
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phreeqc_ptr-> PHRQ_malloc((size_t) ((totals.size() + 1) * sizeof(struct conc)));
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if (c == NULL)
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phreeqc_ptr-> malloc_error();
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int i = 0;
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for (std::map < std::string, cxxISolutionComp >::const_iterator it = totals.begin();
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it != totals.end(); ++it)
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{
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c[i].description = phreeqc_ptr-> string_duplicate(it->second.description.c_str());
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c[i].moles = it->second.moles;
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c[i].input_conc = it->second.input_conc;
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if (it->second.units.size() == 0)
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c[i].units = NULL;
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else
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c[i].units = phreeqc_ptr-> string_hsave(it->second.units.c_str());
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if (it->second.equation_name.size() == 0)
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c[i].equation_name = NULL;
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else
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c[i].equation_name = phreeqc_ptr-> string_hsave(it->second.equation_name.c_str());
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c[i].phase_si = it->second.phase_si;
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c[i].n_pe = it->second.n_pe;
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c[i].as = phreeqc_ptr-> string_hsave(it->second.as.c_str());
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c[i].gfw = it->second.gfw;
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//c[i].skip = 0;
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c[i].phase = NULL;
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i++;
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}
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c[i].description = NULL;
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return (c);
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}
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#endif
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#ifdef SKIP_OR_MOVE_TO_STRUCTURES
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void
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cxxISolutionComp::set_gfw(Phreeqc * phreeqc_ptr)
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{
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// return gfw
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if (this->gfw > 0.0)
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return;
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// calculate gfw from as or from master species gfw
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if (this->as.size() != 0)
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{
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/* use given chemical formula to calculate gfw */
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LDBLE l_gfw;
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if (phreeqc_ptr-> compute_gfw(this->as.c_str(), &l_gfw) == ERROR)
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{
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std::ostringstream oss;
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oss << "Could not compute gfw, " << this->as;
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error_msg(oss.str().c_str(), CONTINUE);
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return;
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}
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//if (this->description == "Alkalinity" && this->as == "CaCO3")
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if (strcmp(this->description.c_str(), "Alkalinity") == 0
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&& strcmp(this->as.c_str(), "CaCO3"))
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{
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l_gfw /= 2.;
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}
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this->gfw = l_gfw;
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return;
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}
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/* use gfw of master species */
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std::string str(this->description);
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struct master *master_ptr = phreeqc_ptr-> master_bsearch(str.c_str());
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if (master_ptr != NULL)
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{
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/* use gfw for element redox state */
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this->gfw = master_ptr->gfw;
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return;
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}
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std::ostringstream oss;
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oss << "Could not find gfw, " << this->description;
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error_msg(oss.str().c_str(), CONTINUE);
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return;
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}
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#endif
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#ifdef SKIP
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cxxISolutionComp::STATUS_TYPE cxxISolutionComp::read(CParser & parser,
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cxxISolution & solution)
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{
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// std::string& str = parser.line();
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std::string str = parser.line();
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// defaults set in ctor
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// Remove space between "kg" and "solution" or "water" in units
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Utilities::replace("Kg", "kg", str);
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Utilities::replace("KG", "kg", str);
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while (Utilities::replace("kg ", "kg", str));
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std::istream::pos_type ptr = 0;
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//
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// Read master species list for mass balance equation
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//
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std::string token;
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std::string token1;
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int
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count_redox_states = 0;
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CParser::TOKEN_TYPE j;
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while (((j = parser.copy_token(token, ptr)) == CParser::TT_UPPER) ||
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(token[0] == '[') ||
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(Utilities::strcmp_nocase_arg1(token.c_str(), "ph") == 0) ||
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(Utilities::strcmp_nocase_arg1(token.c_str(), "pe") == 0))
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{
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++count_redox_states;
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Utilities::replace("(+", "(", token);
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if (count_redox_states > 1)
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token1 += " ";
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token1 += token;
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}
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if (count_redox_states == 0)
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{
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parser.incr_input_error();
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parser.
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error_msg
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("No element or master species given for concentration input.",
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PHRQ_io::OT_CONTINUE);
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return cxxISolutionComp::ERROR;
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}
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description = token1;
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// Determine if reading alkalinity, allow equivalents for units
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Utilities::str_tolower(token1);
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bool
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alk = false;
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if (token1.find("alk") == 0)
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{
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alk = true;
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}
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// Read concentration
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if (!(std::istringstream(token) >> this->input_conc))
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{
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std::ostringstream err;
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err << "Concentration data error for " << token1 <<
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" in solution input.";
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parser.error_msg(err, PHRQ_io::OT_CONTINUE);
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return cxxISolutionComp::ERROR;
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}
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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// Read optional data
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token1 = token;
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// Check for units info
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if (parser.check_units(token1, alk, false, solution.get_units(), false) ==
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CParser::OK)
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{
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if (parser.
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check_units(token1, alk, false, solution.get_units(),
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true) == CParser::OK)
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{
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this->units = token1;
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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}
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else
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{
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return cxxISolutionComp::ERROR;
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}
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}
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// Check for "as" followed by formula to be used for gfw
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token1 = token;
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Utilities::str_tolower(token1);
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if (token1.compare("as") == 0)
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{
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parser.copy_token(token, ptr);
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this->as = token;
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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}
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// Check for "gfw" followed by gram formula weight
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else if (token1.compare("gfw") == 0)
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{
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if (parser.copy_token(token, ptr) != CParser::TT_DIGIT)
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{
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parser.error_msg("Expecting gram formula weight.",
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PHRQ_io::OT_CONTINUE);
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return cxxISolutionComp::ERROR;
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}
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else
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{
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parser.get_iss() >> this->gfw;
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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}
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}
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// Check for redox couple for pe
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if (Utilities::strcmp_nocase_arg1(token.c_str(), "pe") == 0)
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{
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this->n_pe = cxxPe_Data::store(solution.pe, token);
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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}
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else if (token.find("/") != std::string::npos)
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{
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if (parser.parse_couple(token) == CParser::OK)
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{
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this->n_pe = cxxPe_Data::store(solution.pe, token);
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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}
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else
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{
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return cxxISolutionComp::ERROR;
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}
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}
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// Must have phase
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this->equation_name = token;
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if ((j = parser.copy_token(token, ptr)) == CParser::TT_EMPTY)
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return cxxISolutionComp::OK;
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// Check for saturation index
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if (!(std::istringstream(token) >> this->phase_si))
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{
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parser.error_msg("Expected saturation index.", PHRQ_io::OT_CONTINUE);
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return cxxISolutionComp::ERROR;
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}
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return cxxISolutionComp::OK;
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}
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#endif
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#ifdef SKIP
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void
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cxxISolutionComp::dump_xml(std::ostream & s_oss, unsigned int indent) const const
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{
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unsigned int i;
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std::string indent0("");
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for (i = 0; i < indent; ++i)
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indent0.append(Utilities::INDENT);
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s_oss << indent0;
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s_oss << "<soln_total";
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s_oss << " conc_desc=\"" << this->description << "\"";
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s_oss << " conc_moles=\"" << this->moles << "\"";
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s_oss << "\">" << "\n";
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}
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#endif
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/* ---------------------------------------------------------------------- */
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CParser::STATUS_TYPE cxxISolutionComp::
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read(const char *line_in, cxxSolution *solution_ptr)
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/* ---------------------------------------------------------------------- */
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{
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/*
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* Remove space between "kg" and "solution" or "water" in units
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*/
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std::string line = line_in;
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Utilities::replace("Kg", "kg", line);
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Utilities::replace("KG", "kg", line);
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while (Utilities::replace("kg ", "kg", line) == TRUE);
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/*
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* Read master species list for mass balance equation
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*/
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std::string master_list;
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std::string token;
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std::string::iterator b = line.begin();
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std::string::iterator e = line.end();
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{
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int j;
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while (((j = CParser::copy_token(token, b, e)) == CParser::TT_UPPER) ||
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(token[0] == '[') ||
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(Utilities::strcmp_nocase(token.c_str(), "ph") == 0) ||
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(Utilities::strcmp_nocase(token.c_str(), "pe") == 0))
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{
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Utilities::replace("(+", "(", token);
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if (master_list.size() > 0)
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master_list.append(" ");
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master_list.append(token);
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}
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}
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if (master_list.size() == 0)
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{
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error_msg
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("No element or master species given for concentration input.",
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PHRQ_io::OT_CONTINUE);
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return (CParser::PARSER_ERROR);
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}
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this->Set_description(master_list.c_str());
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/*
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* Determine if reading alkalinity, allow equivalents for units
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*/
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bool alk;
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Utilities::str_tolower(master_list);
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if (strstr(master_list.c_str(), "alk") == master_list.c_str())
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{
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alk = true;
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}
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else
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{
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alk = false;
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}
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/*
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* Read concentration
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*/
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{
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LDBLE dummy;
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int j = sscanf(token.c_str(), SCANFORMAT, &dummy);
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if (j == 0)
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{
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std::ostringstream errstr;
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errstr << "Concentration data error for " << master_list << " in solution input.";
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error_msg(errstr.str().c_str(), PHRQ_io::OT_CONTINUE);
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return (CParser::PARSER_ERROR);
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}
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else
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{
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this->Set_input_conc(dummy);
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}
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if ((j = CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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}
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/*
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* Read optional data
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*/
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std::string token1 = token;
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/*
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* Check for units info
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*/
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CParser parser(this->io);
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if (solution_ptr->Get_initial_data() == NULL)
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{
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error_msg("Initial_data instance not defined in cxxISolutionComp::read", 1);
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}
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if (parser.check_units(token1, alk, false, solution_ptr->Get_initial_data()->Get_units().c_str(), false) == CParser::PARSER_OK)
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{
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if (parser.check_units(token1, alk, false, solution_ptr->Get_initial_data()->Get_units().c_str(), true) == CParser::PARSER_OK)
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{
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this->units = token1;
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if ((CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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}
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else
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{
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return (CParser::PARSER_ERROR);
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}
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}
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/*
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* Check for "as" followed by formula to be used for gfw
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*/
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token1 = token;
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Utilities::str_tolower(token1);
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if (strcmp(token1.c_str(), "as") == 0)
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{
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CParser::copy_token(token, b, e);
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this->as = token;
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if ((CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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/*
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* Check for "gfw" followed by gram formula weight
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*/
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}
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else if (strcmp(token1.c_str(), "gfw") == 0 || strcmp(token1.c_str(), "gfm") == 0)
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{
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if (CParser::copy_token(token, b, e) != DIGIT)
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{
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error_msg("Expecting gram formula weight.", PHRQ_io::OT_CONTINUE);
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return (CParser::PARSER_ERROR);
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}
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else
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{
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sscanf(token.c_str(), SCANFORMAT, &this->gfw);
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if ((CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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}
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}
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/*
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* Check for redox couple for pe
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*/
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if (Utilities::strcmp_nocase(token.c_str(), "pe") == 0)
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{
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this->pe_reaction = token;
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if ((CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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}
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else if (strstr(token.c_str(), "/") != NULL)
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{
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if (parser.parse_couple(token) == CParser::PARSER_OK)
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{
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this->pe_reaction = token;
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if ((CParser::copy_token(token, b, e)) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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}
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else
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{
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return (CParser::PARSER_ERROR);
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}
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}
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/*
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* Must have phase
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*/
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this->equation_name = token;
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if (CParser::copy_token(token, b, e) == CParser::TT_EMPTY)
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return (CParser::PARSER_OK);
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/*
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* Check for saturation index
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*/
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{
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int j = sscanf(token.c_str(), SCANFORMAT,
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&(this->phase_si));
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if (j != 1)
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{
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error_msg("Expected saturation index.", PHRQ_io::OT_CONTINUE);
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return (CParser::PARSER_ERROR);
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}
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}
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return (CParser::PARSER_OK);
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} |