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iphreeqc/phreeqcpp
History
Charlton, Scott R 9b9ee1b061 Closes usgs-coupled/phreeqcrm#12 (#13) 
* Closes usgs-coupled/phreeqcrm#12

* Added yaml-cpp install

* Added yaml-cpp to PhreeqcRM link libraries

* Added yaml-cpp install to cmake builds

* Added compile feature cxx_std_11

* Added toolchain for windows cmake

* Fix autotools build on macOS?

* Changed to c++ headers for math.h and float.h

* Updated 'Test install' step for autotools (macos-latest)
2023-02-26 16:50:20 -07:00
..
common
Merge commit '3765e0cf266655280d362cdf5de35c25892959b6'
2021-10-31 19:41:44 +00:00
PhreeqcKeywords
added newlines for CRAN
2021-09-23 06:37:13 -07:00
.gitlab-ci.yml
Merge commit 'a330bc51e33350cf81008c29742fe570fae074da'
2021-10-31 18:57:52 +00:00
advection.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
basicsubs.cpp
Merge commit 'fb59ec8b19173e55422aef14fd2488cd1aca0680'
2023-01-17 03:32:29 +00:00
chart_icon.gif
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
ChartHandler.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
ChartHandler.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
ChartObject.cpp
added newlines for CRAN
2021-09-23 06:37:13 -07:00
ChartObject.h
Merge commit '2e5f255c794096790125293dcc3af274bed7a61a'
2021-04-07 14:27:20 +00:00
cl1.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
cl1mp.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
class_main.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
CurveObject.cpp
added newlines for CRAN
2021-09-23 06:37:13 -07:00
CurveObject.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
cvdense.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
cvdense.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
cvode.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
cvode.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
cxxKinetics.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
cxxKinetics.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
cxxMix.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
cxxMix.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
dense.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
dense.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Dictionary.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
Dictionary.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
dumper.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
dumper.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Exchange.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
Exchange.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
ExchComp.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
ExchComp.h
Merge commit '7961b1686b4e064ec4ec886e76543074d060129f'
2021-04-06 16:04:54 +00:00
Form1.2005.resX
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Form1.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Form1.resX
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
GasComp.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
GasComp.h
Last of changes for GetGasPhasePressures and GetGasPhasePhi, openmp and mpi. MPI fortrans not tested.
2021-02-27 22:26:48 -07:00
gases.cpp
Merge commit '07a864d1a6ed582ddfae5e1c3bf5b0620c3dd75c'
2021-08-17 15:35:22 +00:00
GasPhase.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
GasPhase.h
Last of changes for GetGasPhasePressures and GetGasPhasePhi, openmp and mpi. MPI fortrans not tested.
2021-02-27 22:26:48 -07:00
global_structures.h
added newlines for CRAN
2021-09-23 06:37:13 -07:00
input.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
integrate.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
inverse.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
ISolution.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
ISolution.h
Merge commit '7961b1686b4e064ec4ec886e76543074d060129f'
2021-04-06 16:04:54 +00:00
ISolutionComp.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
ISolutionComp.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
isotopes.cpp
Merge commit 'e4bd9bafb40c82bff5ef275528ca3dd2836672e5'
2021-09-08 14:35:13 +00:00
kinetics.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
KineticsComp.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
KineticsComp.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
mainsubs.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
Makefile
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Makefile.am
added src/phreeqcpp/common/PHRQ_exports.h
2020-09-15 20:29:41 -06:00
Makefile.old
Merge commit 'b3bf691b4964b3eedbaf04d6ee9bd35f98afb113'
2019-06-05 20:44:26 -06:00
model.cpp
Merge commit '8f2558798f15927fa58343a43c7c14295986ae45'
2021-11-29 15:18:33 +00:00
NA.h
added newlines for CRAN
2021-09-23 06:37:13 -07:00
NameDouble.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
NameDouble.h
Merge commit '2e5f255c794096790125293dcc3af274bed7a61a'
2021-04-07 14:27:20 +00:00
NumKeyword.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
NumKeyword.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
nvector_serial.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
nvector_serial.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
nvector.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
nvector.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
parse.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
PBasic.cpp
Merge commit 'fb59ec8b19173e55422aef14fd2488cd1aca0680'
2023-01-17 03:32:29 +00:00
PBasic.h
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
phast.xsd
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
phqalloc.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
phqalloc.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Phreeqc.cpp
Merge commit 'e4bd9bafb40c82bff5ef275528ca3dd2836672e5'
2021-09-08 14:35:13 +00:00
Phreeqc.h
Closes usgs-coupled/phreeqcrm#12 (#13)
2023-02-26 16:50:20 -07:00
phreeqc.Makefile
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
phreex.ico
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
PHRQ_io_output.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
pitzer_structures.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
pitzer.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
PPassemblage.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
PPassemblage.h
Merge commit '9152ca292e2ea2a042a654b6393b6fcd9160e0d4'
2018-08-02 22:24:30 -06:00
PPassemblageComp.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
PPassemblageComp.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
prep.cpp
Merge commit '07a864d1a6ed582ddfae5e1c3bf5b0620c3dd75c'
2021-08-17 15:35:22 +00:00
Pressure.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
Pressure.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
print.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
Reaction.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
Reaction.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
read.cpp
Merge commit '8f2558798f15927fa58343a43c7c14295986ae45'
2021-11-29 15:18:33 +00:00
ReadClass.cxx
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
readtr.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
runner.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
runner.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
SelectedOutput.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
SelectedOutput.h
Merge commit '6a5bb8aba56d568bd139bc3aed7363d929397790'
2021-03-12 16:57:10 +00:00
Serializer.cxx
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
Serializer.h
added newlines for CRAN
2021-09-23 06:37:13 -07:00
sit.cpp
Merge commit '8f2558798f15927fa58343a43c7c14295986ae45'
2021-11-29 15:18:33 +00:00
smalldense.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
smalldense.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Solution.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
Solution.h
Added GetSpeciesLog10Molalities. Tested OpenMP with VS. Tested MPI with MinGW. Fortran, C, and C++ seem to work.
2021-02-21 21:13:05 -07:00
SolutionIsotope.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
SolutionIsotope.h
Merge commit '2e5f255c794096790125293dcc3af274bed7a61a'
2021-04-07 14:27:20 +00:00
spread.cpp
Merge commit 'e4bd9bafb40c82bff5ef275528ca3dd2836672e5'
2021-09-08 14:35:13 +00:00
SS.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
SS.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
SSassemblage.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
SSassemblage.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
SScomp.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
SScomp.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
step.cpp
Merge commit '07a864d1a6ed582ddfae5e1c3bf5b0620c3dd75c'
2021-08-17 15:35:22 +00:00
StorageBin.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
StorageBin.h
changed restart file to include UZ
2018-11-30 17:41:13 -07:00
StorageBinList.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
StorageBinList.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
structures.cpp
Merge commit '754ea3a9bc11cd1f7d350ff217bdb3dcd3af3d97'
2021-11-09 01:59:31 +00:00
sundialsmath.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
sundialsmath.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
sundialstypes.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
Surface.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
Surface.h
Merge commit '9285985dc0222cf6fde33c32625027d376159b3b'
2018-08-22 16:44:20 -06:00
SurfaceCharge.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
SurfaceCharge.h
Merge commit '2e5f255c794096790125293dcc3af274bed7a61a'
2021-04-07 14:27:20 +00:00
SurfaceComp.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
SurfaceComp.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
System.cxx
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
System.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
tally.cpp
made tally_table a vector of class tally
2021-04-26 23:38:21 -06:00
Temperature.cxx
added newlines for CRAN
2021-09-23 06:37:13 -07:00
Temperature.h
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
test.xml
Add 'phreeqcpp/' from commit 'da9d06b423a87ed5eae503c0faf779ac11c96027'
2018-07-31 16:56:09 -06:00
tidy.cpp
Merge commit '754ea3a9bc11cd1f7d350ff217bdb3dcd3af3d97'
2021-11-09 01:59:31 +00:00
transport.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
Use.cpp
Merge commit '58b0d1fccfc6763e569bee30f4ab5e4122963ede'
2021-04-23 20:14:47 +00:00
Use.h
Merge commit '2e5f255c794096790125293dcc3af274bed7a61a'
2021-04-07 14:27:20 +00:00
UserPunch.cpp
Merge commit '4cee19d768863d8f09b3629ee36a11e1a6030f33'
2021-04-19 23:23:32 +00:00
UserPunch.h
added newlines for CRAN
2021-09-23 06:37:13 -07:00
utilities.cpp
[iphreeqc] Issue 8 -- change sprintf to snprintf for CRAN (#9)
2023-01-14 22:14:20 -07:00
ZedGraph.dll
Merge commit 'fc8fe3e98fb3f1e42482636938537ed6028b3ee6'
2020-08-31 03:45:31 +00:00