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Update chem.GetField() to chem.getField() in poet.cpp

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This commit is contained in:
Max Luebke 2024-04-03 10:46:25 +00:00
parent 465a6595b0
commit d389347ad3
2 changed files with 3 additions and 7 deletions
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4
src/Chemistry/ChemistryModule.hpp
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@ -57,10 +57,6 @@ public:
*/
void simulate(double dt);
/**
* Returns the chemical field.
*/
auto &GetField() { return this->chem_field; }
/**
* Returns all known species names, including not only aqueous species, but
* also equilibrium, exchange, surface and kinetic reactants.

6
src/poet.cpp
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@ -254,7 +254,7 @@ static Rcpp::List RunMasterLoop(RInside &R, const RuntimeParameters &params,
// TODO: transport to diffusion
diffusion.simulate(dt);
chem.GetField().update(diffusion.getField());
chem.getField().update(diffusion.getField());
// chem.getfield().update(diffusion.getfield());
@ -262,10 +262,10 @@ static Rcpp::List RunMasterLoop(RInside &R, const RuntimeParameters &params,
chem.simulate(dt);
writeFieldsToR(R, diffusion.getField(), chem.GetField());
writeFieldsToR(R, diffusion.getField(), chem.getField());
// R["store_result"] = true;
// R.parseEval("mysetup$store_result <- TRUE");
diffusion.getField().update(chem.GetField());
diffusion.getField().update(chem.getField());
R["req_dt"] = dt;
R["simtime"] = (sim_time += dt);