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fix: update dht_species values for barite and celestite in benchmark scripts
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@ -35,15 +35,15 @@ diffusion_setup <- list(
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dht_species <- c(
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dht_species <- c(
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"H" = 7,
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"H" = 3,
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"O" = 7,
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"O" = 3,
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"Charge" = 4,
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"Charge" = 6,
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"Ba" = 7,
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"Ba" = 6,
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"Cl" = 7,
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"Cl" = 6,
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"S(6)" = 7,
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"S" = 6,
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"Sr" = 7,
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"Sr" = 6,
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"Barite" = 4,
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"Barite" = 5,
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"Celestite" = 4
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"Celestite" = 5
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)
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)
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chemistry_setup <- list(
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chemistry_setup <- list(
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@ -11,9 +11,9 @@ grid_def <- matrix(2, nrow = rows, ncol = cols)
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grid_setup <- list(
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grid_setup <- list(
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pqc_in_file = "./barite.pqi",
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pqc_in_file = "./barite.pqi",
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pqc_db_file = "./db_barite.dat", ## Path to the database file for Phreeqc
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pqc_db_file = "./db_barite.dat", ## Path to the database file for Phreeqc
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grid_def = grid_def, ## Definition of the grid, containing IDs according to the Phreeqc input script
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grid_def = grid_def, ## Definition of the grid, containing IDs according to the Phreeqc input script
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grid_size = c(s_rows, s_cols), ## Size of the grid in meters
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grid_size = c(s_rows, s_cols), ## Size of the grid in meters
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constant_cells = c() ## IDs of cells with constant concentration
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constant_cells = c() ## IDs of cells with constant concentration
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)
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)
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bound_length <- 2
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bound_length <- 2
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@ -36,15 +36,15 @@ diffusion_setup <- list(
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)
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dht_species <- c(
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dht_species <- c(
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"H" = 4,
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"H" = 3,
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"O" = 10,
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"O" = 3,
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"Charge" = 4,
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"Charge" = 3,
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"Ba" = 7,
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"Ba" = 6,
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"Cl" = 4,
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"Cl" = 6,
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"S(6)" = 7,
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"S" = 6,
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"Sr" = 4,
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"Sr" = 6,
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"Barite" = 2,
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"Barite" = 5,
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"Celestite" = 2
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"Celestite" = 5
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)
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)
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chemistry_setup <- list(
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chemistry_setup <- list(
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