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structure of hdf5_init

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Marco De Lucia 2025-05-19 16:16:37 +02:00
parent ccd54aaa09
commit e94eadd5cb
1 changed files with 39 additions and 0 deletions
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struct_init.org Normal file
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Grid/MemoryOrder (single integer 0=zyx (colmaj); 1=xyz (rowmaj))
Grid/Dimensionality (single integer)
Grid/Cells (uint32_t length=Grid/Dimensionality)
Grid/Size (double length=Grid/Dimensionality)
Grid/ConstantCells (uint32_t array)
Grid/Porosity/Length (int 1 (=homog))
(int prod(Grid/Cells))
Grid/Porosity/Data (double length=Grid/Porosity/Length)
PhreeqcMatrix/Names (string vector)
PhreeqcMatrix/Data (double Matrix length(Names)*NumberOfPQC_IDs)
InitialConditions/Names (vector of string (=colnames PhreeqcMatrix))
InitialConditions/Data (vector (length Names) of arrays (double length=prod(Cells)))
Diffusion/Names (string vector) transported solutes
Diffusion/Boundaries/N int matrix N*3=(ind_bound, type, phreeqc_id)
Diffusion/Boundaries/W ''
Diffusion/Boundaries/S ''
Diffusion/Boundaries/E ''
Diffusion/Boundaries/T ''
Diffusion/Boundaries/B ''
Diffusion/InnerBoundaries placeholder
Diffusion/Alpha
Diffusion/Alpha/x (double length=1 (=homog))
(double length=prod(Grid/Cells))
Diffusion/Alpha/y
Diffusion/Alpha/z
Chemistry
Chemistry/Database (string)
Chemistry/Input (string)
Chemistry/PhreeqcIDs (int vector)
Chemistry/Options
Chemistry/Options/H0O0 (bool)
Chemistry/Options/WithRedox (bool)