mirror of
https://git.gfz-potsdam.de/naaice/poet.git
synced 2025-12-16 04:48:23 +01:00
perf: remove unused R libraries/sources
This commit is contained in:
parent
f78842c6d6
commit
f7b2e61589
@ -1 +1 @@
|
|||||||
install(FILES kin_r_library.R parallel_r_library.R DESTINATION R_lib)
|
install(FILES kin_r_library.R DESTINATION R_lib)
|
||||||
|
|||||||
@ -1,58 +0,0 @@
|
|||||||
### Copyright (C) 2018-2021 Marco De Lucia (GFZ Potsdam)
|
|
||||||
###
|
|
||||||
### POET is free software; you can redistribute it and/or modify it under the
|
|
||||||
### terms of the GNU General Public License as published by the Free Software
|
|
||||||
### Foundation; either version 2 of the License, or (at your option) any later
|
|
||||||
### version.
|
|
||||||
###
|
|
||||||
### POET is distributed in the hope that it will be useful, but WITHOUT ANY
|
|
||||||
### WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
|
|
||||||
### A PARTICULAR PURPOSE. See the GNU General Public License for more details.
|
|
||||||
###
|
|
||||||
### You should have received a copy of the GNU General Public License along with
|
|
||||||
### this program; if not, write to the Free Software Foundation, Inc., 51
|
|
||||||
### Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
|
|
||||||
|
|
||||||
distribute_work_packages <- function(len, package_size)
|
|
||||||
{
|
|
||||||
## Check if work_package is a divisor of grid length and act
|
|
||||||
## accordingly
|
|
||||||
if ((len %% package_size) == 0) {
|
|
||||||
n_packages <- len/package_size
|
|
||||||
} else {
|
|
||||||
n_packages <- floor(len/package_size) + 1
|
|
||||||
}
|
|
||||||
|
|
||||||
ids <- rep(1:n_packages, times=package_size, each = 1)[1:len]
|
|
||||||
return(ids)
|
|
||||||
}
|
|
||||||
|
|
||||||
compute_wp_sizes <- function(ids)
|
|
||||||
{
|
|
||||||
as.integer(table(ids))
|
|
||||||
}
|
|
||||||
|
|
||||||
shuffle_field <- function(data, send_ord)
|
|
||||||
{
|
|
||||||
shf <- data[send_ord,]
|
|
||||||
return(shf)
|
|
||||||
}
|
|
||||||
|
|
||||||
unshuffle_field <- function(data, send_ord)
|
|
||||||
{
|
|
||||||
data[send_ord,] <- data
|
|
||||||
rownames(data) <- NULL
|
|
||||||
return(data)
|
|
||||||
}
|
|
||||||
|
|
||||||
stat_wp_sizes <- function(sizes)
|
|
||||||
{
|
|
||||||
res <- as.data.frame(table(sizes))
|
|
||||||
if (nrow(res)>1) {
|
|
||||||
msgm("Chosen work_package_size is not a divisor of grid length. ")
|
|
||||||
colnames(res) <- c("Size", "N")
|
|
||||||
print(res)
|
|
||||||
} else {
|
|
||||||
msgm("All work packages of length ", sizes[1])
|
|
||||||
}
|
|
||||||
}
|
|
||||||
@ -66,10 +66,8 @@ int main(int argc, char *argv[]) {
|
|||||||
|
|
||||||
/*Loading Dependencies*/
|
/*Loading Dependencies*/
|
||||||
// TODO: kann raus
|
// TODO: kann raus
|
||||||
std::string r_load_dependencies = "suppressMessages(library(Rmufits));"
|
std::string r_load_dependencies = "suppressMessages(library(RedModRphree));"
|
||||||
"suppressMessages(library(RedModRphree));"
|
"source('../R_lib/kin_r_library.R');";
|
||||||
"source('../R_lib/kin_r_library.R');"
|
|
||||||
"source('../R_lib/parallel_r_library.R');";
|
|
||||||
R.parseEvalQ(r_load_dependencies);
|
R.parseEvalQ(r_load_dependencies);
|
||||||
|
|
||||||
SimParams params(world_rank, world_size);
|
SimParams params(world_rank, world_size);
|
||||||
|
|||||||
Loading…
x
Reference in New Issue
Block a user