poet/include/highfive/bits/H5Dataspace_misc.hpp

147 lines
4.3 KiB
C++

/*
* Copyright (c), 2017, Adrien Devresse <adrien.devresse@epfl.ch>
*
* Distributed under the Boost Software License, Version 1.0.
* (See accompanying file LICENSE_1_0.txt or copy at
* http://www.boost.org/LICENSE_1_0.txt)
*
*/
#pragma once
#include <array>
#include <initializer_list>
#include <vector>
#include <numeric>
#include <H5Spublic.h>
#include "H5Utils.hpp"
#include "H5Converter_misc.hpp"
#include "h5s_wrapper.hpp"
namespace HighFive {
namespace detail {
inline DataSpace make_data_space(hid_t hid) {
return DataSpace::fromId(hid);
}
} // namespace detail
inline DataSpace::DataSpace(const std::vector<size_t>& dims)
: DataSpace(dims.begin(), dims.end()) {}
template <size_t N>
inline DataSpace::DataSpace(const std::array<size_t, N>& dims)
: DataSpace(dims.begin(), dims.end()) {}
inline DataSpace::DataSpace(const std::initializer_list<size_t>& items)
: DataSpace(std::vector<size_t>(items)) {}
template <typename... Args>
inline DataSpace::DataSpace(size_t dim1, Args... dims)
: DataSpace(std::vector<size_t>{dim1, static_cast<size_t>(dims)...}) {}
template <class IT, typename>
inline DataSpace::DataSpace(const IT begin, const IT end) {
std::vector<hsize_t> real_dims(begin, end);
_hid = detail::h5s_create_simple(int(real_dims.size()), real_dims.data(), nullptr);
}
inline DataSpace DataSpace::Scalar() {
return DataSpace(DataSpace::dataspace_scalar);
}
inline DataSpace DataSpace::Null() {
return DataSpace(DataSpace::dataspace_null);
}
inline DataSpace::DataSpace(const std::vector<size_t>& dims, const std::vector<size_t>& maxdims) {
if (dims.size() != maxdims.size()) {
throw DataSpaceException("dims and maxdims must be the same length.");
}
std::vector<hsize_t> real_dims(dims.begin(), dims.end());
std::vector<hsize_t> real_maxdims(maxdims.begin(), maxdims.end());
// Replace unlimited flag with actual HDF one
std::replace(real_maxdims.begin(),
real_maxdims.end(),
static_cast<hsize_t>(DataSpace::UNLIMITED),
H5S_UNLIMITED);
_hid = detail::h5s_create_simple(int(dims.size()), real_dims.data(), real_maxdims.data());
}
inline DataSpace::DataSpace(DataSpace::DataspaceType space_type) {
auto to_hdf5 = [](auto _space_type) -> H5S_class_t {
switch (_space_type) {
case DataSpace::dataspace_scalar:
return H5S_SCALAR;
case DataSpace::dataspace_null:
return H5S_NULL;
default:
throw DataSpaceException(
"Invalid dataspace type: should be "
"dataspace_scalar or dataspace_null");
}
};
_hid = detail::h5s_create(to_hdf5(space_type));
}
inline DataSpace DataSpace::clone() const {
DataSpace res;
res._hid = detail::h5s_copy(_hid);
return res;
}
inline size_t DataSpace::getNumberDimensions() const {
return static_cast<size_t>(detail::h5s_get_simple_extent_ndims(_hid));
}
inline std::vector<size_t> DataSpace::getDimensions() const {
std::vector<hsize_t> dims(getNumberDimensions());
if (!dims.empty()) {
detail::h5s_get_simple_extent_dims(_hid, dims.data(), nullptr);
}
return details::to_vector_size_t(std::move(dims));
}
inline size_t DataSpace::getElementCount() const {
return static_cast<size_t>(detail::h5s_get_simple_extent_npoints(_hid));
}
inline std::vector<size_t> DataSpace::getMaxDimensions() const {
std::vector<hsize_t> maxdims(getNumberDimensions());
detail::h5s_get_simple_extent_dims(_hid, nullptr, maxdims.data());
std::replace(maxdims.begin(),
maxdims.end(),
H5S_UNLIMITED,
static_cast<hsize_t>(DataSpace::UNLIMITED));
return details::to_vector_size_t(maxdims);
}
template <typename T>
inline DataSpace DataSpace::From(const T& value) {
auto dims = details::inspector<T>::getDimensions(value);
return DataSpace(dims);
}
template <std::size_t N, std::size_t Width>
inline DataSpace DataSpace::FromCharArrayStrings(const char (&)[N][Width]) {
return DataSpace(N);
}
namespace details {
inline bool checkDimensions(const DataSpace& mem_space,
size_t min_dim_requested,
size_t max_dim_requested) {
return checkDimensions(mem_space.getDimensions(), min_dim_requested, max_dim_requested);
}
} // namespace details
} // namespace HighFive