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Fix indexiation of bc field
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628e3288be
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@ -149,8 +149,8 @@ void Diffusion::BTCSDiffusion::simulate2D(
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#pragma omp parallel for schedule(dynamic)
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#pragma omp parallel for schedule(dynamic)
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for (int i = 0; i < n_rows; i++) {
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for (int i = 0; i < n_rows; i++) {
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DVectorRowMajor input_field = c.row(i);
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DVectorRowMajor input_field = c.row(i);
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simulate_base(input_field, bc.row(i), alpha.row(i), dx, local_dt, n_cols,
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simulate_base(input_field, bc.row(i + 1), alpha.row(i), dx, local_dt,
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t0_c.row(i));
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n_cols, t0_c.row(i));
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c.row(i) << input_field;
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c.row(i) << input_field;
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}
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}
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@ -162,8 +162,8 @@ void Diffusion::BTCSDiffusion::simulate2D(
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#pragma omp parallel for schedule(dynamic)
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#pragma omp parallel for schedule(dynamic)
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for (int i = 0; i < n_cols; i++) {
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for (int i = 0; i < n_cols; i++) {
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DVectorRowMajor input_field = c.col(i);
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DVectorRowMajor input_field = c.col(i);
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simulate_base(input_field, bc.col(i), alpha.col(i), dx, local_dt, n_rows,
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simulate_base(input_field, bc.col(i + 1), alpha.col(i), dx, local_dt,
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t0_c.row(i));
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n_rows, t0_c.row(i));
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c.col(i) << input_field.transpose();
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c.col(i) << input_field.transpose();
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}
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}
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}
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}
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@ -183,7 +183,7 @@ auto Diffusion::BTCSDiffusion::calc_t0_c(const DMatrixRowMajor &c,
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// first, iterate over first row
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// first, iterate over first row
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for (int j = 0; j < n_cols; j++) {
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for (int j = 0; j < n_cols; j++) {
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boundary_condition tmp_bc = bc(0,j+1);
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boundary_condition tmp_bc = bc(0, j + 1);
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if (tmp_bc.type == Diffusion::BC_CLOSED)
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if (tmp_bc.type == Diffusion::BC_CLOSED)
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continue;
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continue;
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@ -193,7 +193,7 @@ auto Diffusion::BTCSDiffusion::calc_t0_c(const DMatrixRowMajor &c,
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y_values[2] = c(1, j);
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y_values[2] = c(1, j);
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t0_c(0, j) = time_step * alpha(0, j) *
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t0_c(0, j) = time_step * alpha(0, j) *
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(2*y_values[0] - 3 * y_values[1] + y_values[2]) / (dx * dx);
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(2 * y_values[0] - 3 * y_values[1] + y_values[2]) / (dx * dx);
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}
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}
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// then iterate over inlet
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// then iterate over inlet
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@ -214,7 +214,7 @@ auto Diffusion::BTCSDiffusion::calc_t0_c(const DMatrixRowMajor &c,
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// and finally over last row
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// and finally over last row
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for (int j = 0; j < n_cols; j++) {
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for (int j = 0; j < n_cols; j++) {
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boundary_condition tmp_bc = bc(end+1,j+1);
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boundary_condition tmp_bc = bc(end + 1, j + 1);
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if (tmp_bc.type == Diffusion::BC_CLOSED)
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if (tmp_bc.type == Diffusion::BC_CLOSED)
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continue;
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continue;
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@ -224,7 +224,8 @@ auto Diffusion::BTCSDiffusion::calc_t0_c(const DMatrixRowMajor &c,
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y_values[2] = getBCFromFlux(tmp_bc, c(end, j), alpha(end, j));
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y_values[2] = getBCFromFlux(tmp_bc, c(end, j), alpha(end, j));
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t0_c(end, j) = time_step * alpha(end, j) *
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t0_c(end, j) = time_step * alpha(end, j) *
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(y_values[0] - 3 * y_values[1] + 2*y_values[2]) / (dx * dx);
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(y_values[0] - 3 * y_values[1] + 2 * y_values[2]) /
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(dx * dx);
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}
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}
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return t0_c;
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return t0_c;
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