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83d11d44e1
- Update doxygen compatible comments for all public methods of BTCSDiffusion - Remove commented code lines as we do noit need them anymore. - Added comments at key points at source file of BTCSDiffusion. - Refactor main.cpp to new function signature of =setBoundaryCondtion=
Diffusion module
This is the according repository to the diffusion module we discussed earlier. With this readme I will document all my steps I've done and will do.
Current State
- 1D diffusion is possible by setting bc at left/right end
by handbysetBoundaryCondition()or use the default value (Neumann with gradient 0) Always set concentrations/diffusion coefficients by using std::vecto-
Set concentrations of ghost zones by defining them via a list tuples.
- index 0 points to the left ghost zone
- index 1 to the right ghost zone
- simple datastructure, which is currently just a class called BTCSDiffusion
ToDos
- keep sparse matrix in memory
- allow different boundary conditions at the ends and also inside the grid
- implement 2D diffusion