Max Luebke
0f51d9dfef
fix: apply weights to output values (rates) instead of input values
2023-08-03 17:22:59 +02:00
Max Luebke
15ac79673a
Merge branch 'ml-doc' into v0.x
2023-08-02 14:00:44 +02:00
Max Luebke
55f3be8c18
perf: remove unused parameters from paramlist and parameter structure
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doc: update doc to latest changes
data: update benchmarks to latest changes
2023-08-02 14:00:14 +02:00
Max Luebke
dd1fc5214e
fix: remove mass balance check
2023-08-01 23:19:16 +02:00
Max Luebke
c5676b9a00
chore: update doctest to version 2.4.11
2023-08-01 18:47:56 +02:00
Max Luebke
999ecac139
feat: introduce LookupKey and rounding schemes
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feat: implement data clustering using PHT
feat: implement interpolation
refactor: use named vector for DHT species definition and significant digits
data: remove unusable input scripts
data: move Phreeqc database to benchmark dir
refactor: rename dolomite benchmark directory
refactor: remove DHT prop type from input script
2023-08-01 18:34:50 +02:00
Max Lübke
99e9d84e4e
Merge branch 'rinside-everywhere' into 'main'
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Implement RInside as singleton pattern
See merge request naaice/poet!16
2023-07-21 12:53:07 +02:00
Max Luebke
3940df0283
refactor: implement R runtime as singleton pattern
2023-07-21 12:51:56 +02:00
Max Luebke
eecf8d2b63
refactor: remove support for PhreeqcRM support
2023-07-21 12:43:57 +02:00
Max Luebke
713067c48a
build: build one poet library
2023-07-21 12:35:55 +02:00
Max Lübke
29034310a2
Merge branch 'fix-readme' into 'main'
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Fixed scheme link in README
See merge request naaice/poet!15
2023-07-20 12:28:37 +02:00
Max Luebke
490f65b096
doc: Fixed scheme link in README
2023-07-20 12:27:44 +02:00
Max Lübke
aa30ebb5da
Merge branch '9-toggle-progressbar-with-commandline-option' into 'main'
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Resolve "Toggle progressbar with commandline option"
Closes #9
See merge request naaice/poet!14
2023-07-12 12:57:49 +02:00
Max Luebke
cab0d78b15
feat: toggle progressbar by commandline option
2023-07-12 12:56:36 +02:00
Max Lübke
840792c030
Merge branch '8-remove-non-standard-bits-headers-from-poet-and-its-submodules' into 'main'
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Resolve "Remove non-standard `bits/*` headers from POET and its submodules"
Closes #8
See merge request naaice/poet!13
2023-05-22 11:19:06 +02:00
Max Luebke
ef2e20fd52
fix: remove non-standard bits headers from submodules
2023-05-22 11:17:21 +02:00
Max Lübke
259bd5d4c8
Merge branch '6-dht-support-with-poet-dump' into 'main'
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Resolve "DHT support with POET dump"
Closes #6
See merge request naaice/poet!11
2023-04-24 16:58:49 +02:00
Max Lübke
1d484518f0
fix: re-enable DHT correctly
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feat: store excess H and O instead of total values
2023-04-24 16:58:48 +02:00
Max Lübke
c14820d112
Merge branch '7-use-field-data-structure-instead-plain-vector' into 'main'
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Resolve "Use field data structure instead of plain vector"
Closes #7
See merge request naaice/poet!12
2023-04-24 14:27:10 +02:00
Max Luebke
3c5a762f91
BREAKING CHANGE: use Field data structure instead of plain 1D vector to
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store concentrations
2023-04-24 14:25:55 +02:00
Max Lübke
88de97d79b
Merge branch '5-surface-exchange-benchmark-with-poet' into 'main'
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Resolve "Surface/Exchange benchmark with POET"
Closes #5
See merge request naaice/poet!10
2023-04-18 14:38:15 +02:00
Max Luebke
e214eb1b48
feat: add surface module
2023-04-17 15:52:27 +02:00
Max Lübke
bdd63c044e
Merge branch 'exchange' into 'main'
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Exchange
See merge request naaice/poet!3
2023-04-17 12:38:32 +02:00
Max Luebke
b90e180d87
refactor: remove bits/stdint-uintn.h as header
2023-04-17 12:37:43 +02:00
Max Luebke
59d65e6e29
BREAKING CHANGE: use dump mechanism of PhreeqcRM-GFZ to get and set
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internal variables
feat: enables exchange
data: added exchange only benchmark
data: applied required changes to benchmarks
2023-04-17 12:37:43 +02:00
Max Lübke
31b3ea22f6
Merge branch 'fix-barite' into 'main'
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Fix negative solutions in barite benchmark
See merge request naaice/poet!9
2023-04-13 18:08:46 +02:00
Max Luebke
73d3e5604a
fix: remove unnecessary RoundToZero function from DiffusionModule
2023-04-13 17:26:18 +02:00
Max Luebke
40188b045c
build: add benchmarks to install target
2023-04-13 17:17:36 +02:00
Marco De Lucia
105359e869
restoring CMakeLists
2023-04-11 17:46:48 +02:00
Marco De Lucia
25e53a3ab8
MDL: enable all subdirs in bench/ in CMakeLists
2023-04-11 14:58:48 +02:00
Marco De Lucia
652f319ce9
add bench/barite
2023-04-11 14:58:48 +02:00
Max Lübke
d8f22b6632
Merge branch 'fix-dht-key-size' into 'main'
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fix: wrong key size in DHT
See merge request naaice/poet!5
2023-04-05 12:51:48 +02:00
Max Luebke
e3fcafcf1c
fix: wrong key size in DHT
2023-04-05 11:46:10 +02:00
Max Lübke
106dccc943
Merge branch 'fix-ci' into 'main'
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ci: create build directories for pages
See merge request naaice/poet!7
2023-03-31 15:24:03 +02:00
Max Luebke
cdce7701b8
ci: create build directories for pages
2023-03-31 15:22:49 +02:00
Max Lübke
e29a4bff03
Merge branch 'fix-ci' into 'main'
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Fix CI
See merge request naaice/poet!6
2023-03-31 15:21:23 +02:00
Max Luebke
479ecf4398
ci: improve ci
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ci: add image to repository container registry
2023-03-31 15:19:23 +02:00
Max Luebke
bd559f12c7
fix: remove openssl includes
2023-03-31 15:18:56 +02:00
Max Luebke
3cce4ab9b8
build: remove crypto library as dependency
2023-03-31 15:18:56 +02:00
Max Lübke
810f16f64c
Merge branch 'fix-hashing' into 'main'
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fix: use Murmur hashing for DHT lookup
See merge request naaice/poet!2
2023-03-28 14:31:59 +02:00
Max Luebke
af5edfe766
fix: use Murmur hashing for DHT lookup
2023-03-28 14:27:00 +02:00
Max Lübke
76d71cd816
ci: fix release url and name
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ci: keep source artifacts forever
2023-03-20 15:47:43 +01:00
Max Lübke
a37fd435cb
Merge branch 'move-to-naaice-namespace' into 'main'
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chore: update project to fit in naaice namespace
See merge request naaice/poet!1
2023-03-15 13:27:07 +01:00
Max Lübke
aae5539166
chore: update project to fit in naaice namespace
2023-03-15 13:22:44 +01:00
Max Lübke
c96b024ff6
Merge branch 'add-phreeqcrm' into 'main'
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Refactor ChemistryModule and implement PhreeqcRM parallelization
See merge request sec34/port!22
2023-03-07 13:58:50 +01:00
Max Lübke
83a115faf9
chore: delete unused files
2023-03-07 13:44:41 +01:00
Max Lübke
f6ba639b1d
build: add POET version to doxygen parameter list
2023-03-07 13:44:41 +01:00
Max Lübke
25f503ffc5
doc: update documentation to latest progress
2023-03-07 13:44:41 +01:00
Max Lübke
0692638cb3
fix: converting to data frames substitutes special chars to '.'
2023-03-07 13:44:41 +01:00
Marco De Lucia
d17b758161
data: added surfex benchmark
2023-03-07 13:44:41 +01:00
