Max Luebke
3fdf586e0d
BREAKING CHANGE: use dump mechanism of PhreeqcRM-GFZ to get and set
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internal variables
feat: enables exchange
data: added exchange only benchmark
data: applied required changes to benchmarks
2023-04-17 12:37:43 +02:00
Max Lübke
315ac84423
Merge branch 'fix-barite' into 'main'
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Fix negative solutions in barite benchmark
See merge request naaice/poet!9
2023-04-13 18:08:46 +02:00
Max Luebke
607b939208
fix: remove unnecessary RoundToZero function from DiffusionModule
2023-04-13 17:26:18 +02:00
Max Luebke
5c540af2bf
build: add benchmarks to install target
2023-04-13 17:17:36 +02:00
Marco De Lucia
32bfd7527e
restoring CMakeLists
2023-04-11 17:46:48 +02:00
Marco De Lucia
109ddc3ece
MDL: enable all subdirs in bench/ in CMakeLists
2023-04-11 14:58:48 +02:00
Marco De Lucia
38abf31632
add bench/barite
2023-04-11 14:58:48 +02:00
Max Lübke
b5a5f5409c
Merge branch 'fix-dht-key-size' into 'main'
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fix: wrong key size in DHT
See merge request naaice/poet!5
2023-04-05 12:51:48 +02:00
Max Luebke
956951fc80
fix: wrong key size in DHT
2023-04-05 11:46:10 +02:00
Max Lübke
761cddd469
Merge branch 'fix-ci' into 'main'
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ci: create build directories for pages
See merge request naaice/poet!7
2023-03-31 15:24:03 +02:00
Max Luebke
010a594bb7
ci: create build directories for pages
2023-03-31 15:22:49 +02:00
Max Lübke
4829a0e563
Merge branch 'fix-ci' into 'main'
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Fix CI
See merge request naaice/poet!6
2023-03-31 15:21:23 +02:00
Max Luebke
b3323e01a1
ci: improve ci
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ci: add image to repository container registry
2023-03-31 15:19:23 +02:00
Max Luebke
9f290d584a
fix: remove openssl includes
2023-03-31 15:18:56 +02:00
Max Luebke
18eff17773
build: remove crypto library as dependency
2023-03-31 15:18:56 +02:00
Max Lübke
76dcdf400e
Merge branch 'fix-hashing' into 'main'
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fix: use Murmur hashing for DHT lookup
See merge request naaice/poet!2
2023-03-28 14:31:59 +02:00
Max Luebke
f1a10a9b22
fix: use Murmur hashing for DHT lookup
2023-03-28 14:27:00 +02:00
Max Lübke
1bc2b12184
ci: fix release url and name
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ci: keep source artifacts forever
2023-03-20 15:47:43 +01:00
Max Lübke
4ac93e3a53
Merge branch 'move-to-naaice-namespace' into 'main'
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chore: update project to fit in naaice namespace
See merge request naaice/poet!1
2023-03-15 13:27:07 +01:00
Max Lübke
39103ef857
chore: update project to fit in naaice namespace
2023-03-15 13:22:44 +01:00
Max Lübke
881ed1fea9
Merge branch 'add-phreeqcrm' into 'main'
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Refactor ChemistryModule and implement PhreeqcRM parallelization
See merge request sec34/port!22
2023-03-07 13:58:50 +01:00
Max Lübke
7b48daf756
chore: delete unused files
2023-03-07 13:44:41 +01:00
Max Lübke
5ea2fe5d6f
build: add POET version to doxygen parameter list
2023-03-07 13:44:41 +01:00
Max Lübke
e04da71f92
doc: update documentation to latest progress
2023-03-07 13:44:41 +01:00
Max Lübke
2020a25409
fix: converting to data frames substitutes special chars to '.'
2023-03-07 13:44:41 +01:00
Marco De Lucia
27b94065ea
data: added surfex benchmark
2023-03-07 13:44:41 +01:00
Max Luebke
32d35190cb
fix: write fields using R after chem simulation
2023-03-07 13:44:41 +01:00
Max Luebke
e6819b59bc
BREAKING CHANGE: Introduce ChemistryModule as extension of PhreeqcRM
2023-03-07 13:44:41 +01:00
Max Luebke
a493054f9d
refactor: In SimParams, relocate trivial getter/setters to header file
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refactor: change vector data types of dht_signif_vector and
dht_prop_type_vector to both uint32
2023-03-06 18:07:41 +01:00
Max Luebke
fc79d1d0a8
refactor: DHT_Wrapper class
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feat: add setters to DHT_Wrapper to set prop type vector and signif
vector
refactor: remove dependency from SimParams structure
feat: introduce new header defining DHT types
2023-03-06 18:07:41 +01:00
Max Lübke
1b1ef9eb5c
Merge branch 'fix-ci' into 'main'
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ci: fix pages job name
See merge request sec34/port!21
2023-03-06 18:06:19 +01:00
Max Luebke
7560e56e8c
ci: fix pages job name
2023-03-06 18:04:49 +01:00
Max Lübke
4a46a3fb7d
Merge branch 'doc' into 'main'
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Enhanvcement of CI, enabling doxygen doc generation
See merge request sec34/port!20
2023-03-06 18:00:55 +01:00
Max Luebke
be2159227e
ci: Only build and test on merge request
2023-03-06 17:59:23 +01:00
Max Luebke
062f7a2151
ci: add doxygen docs to pipeline and pages
2023-03-06 17:59:23 +01:00
Max Luebke
8df6341a84
build: improve generation of doxygen docs using cmake/doxygen functions
2023-03-06 17:34:11 +01:00
Max Lübke
d3568594ae
Merge branch 'fix-chem' into 'main'
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chore: update PhreeqcRM-GFZ dependency
See merge request sec34/port!19
2023-03-03 15:51:55 +01:00
Max Lübke
c3ad9a06ca
chore: update PhreeqcRM-GFZ dependency
2023-03-03 15:51:54 +01:00
Max Lübke
29344a3ff0
Merge branch 'implement-field-class' into 'main'
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feat: add Field data structure as substitution of field declaration
See merge request sec34/port!18
2023-03-03 15:43:00 +01:00
Max Luebke
fbb2ad6a67
ci: enable run of tests in CI
2023-03-03 15:41:11 +01:00
Max Luebke
7202a0d1ff
chore: add 'test' to commit group
2023-03-03 15:41:11 +01:00
Max Luebke
357936b639
test: add test cases for Field class
2023-03-03 15:41:11 +01:00
Max Luebke
1129761df3
chore: add doctest as dependency
2023-03-03 15:41:11 +01:00
Max Luebke
86db80ffc3
feat: add Field data structure as substitution of field declaration
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using std::vector
2023-03-03 15:41:11 +01:00
Max Lübke
a579f30bcb
Merge branch 'ci-release' into 'main'
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ci: add automatic release creation on tag
See merge request sec34/port!17
2023-02-09 18:28:40 +01:00
Max Luebke
dcfb75adee
ci: add automatic release creation on tag
2023-02-09 17:28:25 +00:00
Max Lübke
c9859aa206
Merge branch 'fix-rounding' into 'main'
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fix: remove rounding to significant digit +1
See merge request sec34/port!16
2023-02-06 14:05:48 +01:00
Max Luebke
7639bcb045
fix: remove rounding to significant digit +1
2023-02-06 14:04:50 +01:00
Max Lübke
96a71b2a32
Merge branch 'fix-r-code' into 'main'
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Fix r code
See merge request sec34/port!15
2023-01-24 16:48:41 +01:00
Max Luebke
74b1e466df
build: add dolo_diffu_large to install list
2023-01-24 16:47:56 +01:00
