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Author SHA1 Message Date
Max Lübke
0c31a9c372 add benchmark for nico 2024-03-06 12:57:56 +00:00
Max Lübke
32b2c5c741 try closed boundary 2024-03-06 12:57:56 +00:00
Max Lübke
115dd87ba3 add output of time measurements 2024-03-06 12:57:45 +00:00
Max Lübke
272f010047 load constant velocities at instantiation 2024-03-06 12:57:36 +00:00
Max Lübke
4f0a8f3742 add openmp pragmas 2024-03-06 12:57:25 +00:00
Max Lübke
7187582910 Revert "define fluxes and max fluxes as class members" 
This reverts commit d218697c3bc7769c285d8f1e865bf0bd20cf2299.
 2024-03-06 12:57:13 +00:00
Max Lübke
3a2769b1f6 add Phreeqc input script to install target 2024-03-06 12:57:06 +00:00
Max Lübke
7dfe4efc23 define fluxes and max fluxes as class members 2024-03-06 12:57:06 +00:00
Max Luebke
75f1036e3e remove all unusable benchmarks for sake of clarity 2024-03-06 12:56:57 +00:00
Max Luebke
358aa51836 rename header containing file paths for tests 2024-03-06 12:56:57 +00:00
Max Luebke
d6c4be6ea3 fix wrong indexing 2024-03-06 12:56:34 +00:00
Max Luebke
b78d7d1a9b provide additional test input script 2024-03-06 12:56:22 +00:00
Max Luebke
031a2e237b Implement advection into POET 2024-03-06 12:56:22 +00:00
Max Luebke
201564d4d1 Store inactive cells with predefined values (bc) 2024-03-06 12:56:10 +00:00
Marco De Lucia
43b70b089e reverted PlotFlow in Advection2D.R 2024-03-06 12:56:10 +00:00
Marco De Lucia
664d92adf6 added Advection2D.R to util 2024-03-06 12:56:10 +00:00
Max Lübke
9f6b27206e Implemented CFL condition 2024-03-06 12:56:10 +00:00
Max Lübke
5e9639c72d First advection with fixed timestep and volume 2024-03-06 12:55:53 +00:00
Max Luebke
430769f247 prep advection 2024-03-06 12:55:25 +00:00
Max Lübke
1b0d2c92fe Update doxygen configuration 2024-03-06 12:25:30 +00:00
Max Lübke
17bc121d7c Add Dockerfile and devcontainer.json for VS Code development environment 2024-03-06 12:25:17 +00:00
Max Lübke
e74805370e Remove R_lib subdirectory from CMakeLists.txt 2024-03-06 12:24:07 +00:00
Max Lübke
408aac4588 Merge branch 'include_scripts' into 'v0.x' 
Add R library file as string to executable

See merge request naaice/poet!21
 2024-03-06 12:34:49 +01:00
Max Lübke
06c63a125b Add R library file as string to executable 2024-03-06 12:34:02 +01:00
Max Lübke
bfe4d0d751 Merge branch 'restructure' into 'v0.x' 
Refactor build process

See merge request naaice/poet!20
 2024-03-06 12:03:49 +01:00
Max Lübke
f1f56494f9 Remove unused CMakeLists.txt file for SurrogateModels 2024-03-06 12:03:02 +01:00
Max Lübke
58435a94d6 Add OMPI_SKIP_MPICXX to target_compile_definitions in CMakeLists.txt 2024-03-06 12:01:19 +01:00
Max Lübke
5ddc239499 Update CMakeLists.txt and include headers in test files 2024-03-06 11:59:18 +01:00
Max Lübke
a17f40d31c Add Macros.hpp and RInsidePOET.hpp*** 
***Add RInsidePOET class and RHookFunction template***
***Update include paths in SimParams.hpp***
***Update CMakeLists.txt to link poetlib***
***Update DHT_Wrapper.hpp include path***
***Update DiffusionModule.cpp include path***
***Update poet.cpp include paths***
***Add poet.hpp.in
 2024-03-06 11:59:12 +01:00
Max Lübke
547156b017 Remove unused 'app' directory 2024-03-06 11:32:45 +01:00
Max Lübke
599088d964 Refactor build process 
Now include/app paths are combined in the src dir.
 2024-03-06 11:26:52 +01:00
Max Lübke
42e740beb9 Fix broken Dolo large benchmark 
Update surfex to a larger grid size
 2024-03-01 12:57:42 +01:00
Max Lübke
19429516a9 Update initial and boundary conditions for dolo large model 2024-02-26 12:34:42 +01:00
Max Lübke
c685ff536e Add .vscode to .gitignore 2024-02-22 09:47:05 +01:00
Marco De Lucia
3f89321e71 fix: updated bench/barite/{barite.R, barite_interp_eval.R}, added bench/barite/barite_200.R 2024-01-12 12:50:54 +01:00
Max Lübke
2204f0f793 Update file dolo_interp_long.R 2023-11-21 16:25:50 +01:00
Max Lübke
d0e3a5fbe0 docs: improve main SVG 2023-11-01 11:01:38 +01:00
Max Lübke
6bd37ccb5e feat: instead of always storing exact input and output make it dependent 
on the usage of interpolation
 2023-11-01 10:55:46 +01:00
Max Lübke
ba65f72984 feat: make storage of input values in DHT optional 2023-09-08 22:43:52 +02:00
Max Lübke
1b553205cd fix: output DHT size in megabyte 2023-09-07 09:12:44 +02:00
Marco De Lucia
30e510f8ff docs: README for surfex bench 2023-08-26 18:39:50 +02:00
Marco De Lucia
9c68f9d979 fix: stdout time for diffusion step. Fixes in READMEs 2023-08-26 17:34:21 +02:00
Marco De Lucia
d32141bed2 docs: readmes for dolo & barite 2023-08-26 17:22:22 +02:00
Marco De Lucia
ce31648c07 ICs, BCs, fixes 2023-08-26 14:24:26 +02:00
Marco De Lucia
b178dbb082 refs, eqs and text 2023-08-26 13:55:06 +02:00
Marco De Lucia
8e9a31a29e more eqs and text 2023-08-26 13:41:00 +02:00
Marco De Lucia
7b1b247253 eqs and text 2023-08-26 13:10:17 +02:00
Marco De Lucia
273844d073 some fixes 2023-08-26 12:50:12 +02:00
Marco De Lucia
a9a4fe0d0e Revert "Update file README.org" 
This reverts commit 462cf2f08e7426661b419a2f52bb48287f847d94
 2023-08-26 12:49:31 +02:00
Marco De Lucia
462cf2f08e Update file README.org 2023-08-26 12:32:47 +02:00